Rhodanobacter denitrificans: R2APBS1_1526
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Entry
R2APBS1_1526 CDS
T02495
Name
(GenBank) acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00061
Fatty acid biosynthesis
rhd00071
Fatty acid degradation
rhd01100
Metabolic pathways
rhd01212
Fatty acid metabolism
rhd02024
Quorum sensing
rhd04146
Peroxisome
Module
rhd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
R2APBS1_1526
00071 Fatty acid degradation
R2APBS1_1526
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
R2APBS1_1526
09145 Cellular community - prokaryotes
02024 Quorum sensing
R2APBS1_1526
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhd01004
]
R2APBS1_1526
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhd04147
]
R2APBS1_1526
Enzymes [BR:
rhd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
R2APBS1_1526
Lipid biosynthesis proteins [BR:
rhd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
R2APBS1_1526
Exosome [BR:
rhd04147
]
Exosomal proteins
Exosomal proteins of breast milk
R2APBS1_1526
Exosomal proteins of breast cancer cells
R2APBS1_1526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AGG88669
UniProt:
I4WVB1
LinkDB
All DBs
Position
complement(1661771..1663456)
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AA seq
561 aa
AA seq
DB search
MSNERPWLENYPAGVPEQIDVSQYASVPAVLEEAFTRFRDRPAFASFGRQLSYGQIDEMS
RQFAGYLTGVLKLGKGDRIALMMPNVLQYPIALFGALRAGLVVVNTNPMYTARELKHQLE
DSGARAIVVLDNFAATLQHVVAETHVQHVITTGIGDLLGFPKGALINFVLKHVKKMVPAF
DLPQAVRFRDALARGAAHPLQPVTLGHDDIAFLQYTGGTTGVAKGAMLTHGNMVANMLQA
AAWIGTELVTPGEEVIITALPLYHIFSLTANGLVFMRLGGLNWLITNPRDMPGFVKELRK
SGFTALTGVNTLFNGLLNTPGFSELDFSKLHLTLGGGMAVQRAVAERWKKVTGCTLAEAY
GLTETSPAVCINPLDLKEYNGSIGLPVPSTNVAIWSEDGKPLPVGEVGELMVHGPQVMKG
YWNRPDETAKVLGADGWLHTGDIAKMDVNGYFYIVDRKKDMILVSGFNVYPNEVEDAVMA
HPGVLEVAAVGVPDEHSGEVVKLFVVRKDPNLTEEALKQFCRENLTGYKRPKLIEFRDSL
PKSNVGKILRRELRDEKKAQA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaacgtccgtggctggagaactatccagccggcgtgccggaacagatcgac
gtcagtcaatatgcttcggtaccggcggtgctggaagaagcgttcacccgcttccgcgac
cgcccggcgttcgccagcttcggccgccagctcagctacggccagatcgacgagatgagc
cgccagttcgccggttacctcactggcgtgctcaagctcggcaagggcgatcgcatcgcg
ctcatgatgccgaacgtgctgcagtatccgatcgccctgttcggcgcgctgcgcgccggc
ctggttgtggtcaacaccaacccgatgtacaccgcgcgcgaactgaagcaccagctggaa
gattcgggtgccagagcgatcgtggtactggacaacttcgccgccaccttgcagcacgtc
gtggccgaaacccacgtgcagcacgtcatcaccaccggcatcggcgacctgctcggcttc
cccaagggcgcgctgatcaacttcgtgctgaagcacgtgaagaagatggtgcccgcgttc
gatctgccgcaggccgtgcgcttccgcgacgcgctcgcgcgcggcgcggcgcatccgctg
caaccggtgacgctgggccacgacgacatcgccttcctgcaatacaccggcggcaccacc
ggcgtggccaagggcgccatgctgacccacggcaacatggtggcgaacatgctgcaggct
gccgcctggatcggcaccgagctggtcacgcccggcgaggaagtgatcatcaccgcgctg
ccgctgtatcacatcttctcgctgaccgcgaacggcctggtcttcatgcgcctgggcggg
ctcaactggctgatcaccaacccgcgcgacatgcccggcttcgtcaaggaactgcgcaag
tccggcttcaccgcgctgaccggcgtcaacacgctgttcaacggcctgctcaacacgccc
ggtttttccgaactggatttctcgaagctgcacctcaccctgggcggcggcatggcggtg
cagcgcgccgtggccgaacgctggaagaaggtcaccggctgcaccctggccgaggcctac
ggcctgaccgaaacctcgcccgcggtctgcatcaatccgctggacctcaaggaatacaac
ggctcgatcggcctgccggtaccgtccaccaatgtggcgatctggtcggaggacggcaag
ccgctgccggtcggcgaggtcggcgaactgatggtgcacggaccgcaggtgatgaagggc
tactggaaccgcccggacgagaccgccaaggtgctcggcgccgatggctggctgcacacc
ggcgacatcgcgaagatggatgtgaacggatacttctacatcgtcgaccgcaagaaggac
atgatcctggtgtccggcttcaacgtgtatccgaacgaggtcgaggacgccgtgatggcg
caccccggtgtgctcgaggtggccgcggtcggcgtgccggacgagcattccggcgaagtg
gtgaagctgttcgtggtgcgcaaggacccgaacctcaccgaagaagccctcaagcagttc
tgccgcgagaacctcaccggctacaaacggcccaagctgatcgagttccgcgacagcctg
ccgaagagcaacgtgggcaagatcctgcgccgcgagctgcgcgacgagaaaaaagcccag
gcctga
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