Rhodanobacter denitrificans: R2APBS1_1798
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Entry
R2APBS1_1798 CDS
T02495
Name
(GenBank) HhH-GPD superfamily base excision DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R2APBS1_1798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhd03400
]
R2APBS1_1798
Enzymes [BR:
rhd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
R2APBS1_1798
DNA repair and recombination proteins [BR:
rhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R2APBS1_1798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AGG88925
UniProt:
M4NDS9
LinkDB
All DBs
Position
1959099..1959746
Genome browser
AA seq
215 aa
AA seq
DB search
MKRTVDASTFLASIDADWAGLVAQVGPCGHEPKPAREPYEALVRAVAYQQLHVKAGDAIL
ARLLALHPRRAFPSPAQLRDADFDSMRACGFSARKIETIRGIAAATLKGVVPDLSAALAL
PDEELIARLSVLKGIGRWTVEMFLIYSLDRPDILPADDFGVREGYRLLKSLETAPTPKAL
AAIGAAWSPYRTAAAWYLWRVPRPSKAKAKQAAVG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggactgtcgatgcgtccacattcctggcctcgatcgacgccgattgggcaggc
ctggttgcgcaggtcggcccctgcggtcacgagccgaaaccggcgcgcgagccgtacgag
gcgctggtgcgcgcggtggcctaccagcaactgcatgtgaaggccggcgacgcgatcctg
gcgcggctgttggctttgcatccgcggcgggcgtttccgtcgccggcgcaattgcgcgat
gccgacttcgacagcatgcgcgcctgcggcttttcggcgcgcaagatcgaaacgatccgc
ggcatcgccgcggccacgctgaaaggtgtggtgccggacctgtccgcggccctggcgctg
ccggacgaggaactgatcgcccggctcagcgtgctgaaagggatcggccgctggacggtg
gagatgttcctgatctacagcctggaccggcccgacatcctgccggcagacgacttcggc
gtgcgcgagggctaccgtctgctgaagtcgctggaaacggcgcccacaccgaaggcgctg
gcggcgatcggtgcggcctggagtccgtatcgtactgccgctgcctggtatctgtggcgc
gtgccgcggccgtcgaaggcgaaggctaagcaggcggcagtgggctga
DBGET
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