Rhodanobacter denitrificans: R2APBS1_1810
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Entry
R2APBS1_1810 CDS
T02495
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
rhd
Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhd03032
]
R2APBS1_1810
03036 Chromosome and associated proteins [BR:
rhd03036
]
R2APBS1_1810
03400 DNA repair and recombination proteins [BR:
rhd03400
]
R2APBS1_1810
DNA replication proteins [BR:
rhd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
R2APBS1_1810
Chromosome and associated proteins [BR:
rhd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
R2APBS1_1810
DNA repair and recombination proteins [BR:
rhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
R2APBS1_1810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AGG88937
UniProt:
I4WXJ6
LinkDB
All DBs
Position
complement(1969705..1970004)
Genome browser
AA seq
99 aa
AA seq
DB search
MTKSELIEALARRQTHLAFADVEMAVKSVIEQMSHALAHGERIEVRGFGSFALHYRPPRM
GRNPKTGEAVALPGKHVPHFKPGKELRERVNQDLEQKIA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatccgaattgatcgaggcgctcgccaggcgccagacccatcttgcgtttgcg
gacgtcgagatggccgtcaagagcgtcatcgagcagatgagccacgccctggcccatggc
gaacgcatcgaggtgcgtggcttcggcagcttcgcattgcactaccggccgccgcggatg
gggcgcaaccccaagacgggcgaggccgtggcgctgcccggcaagcacgttccgcacttc
aagccgggcaaggaattgcgcgagcgcgtcaaccaggatctggagcagaaaatcgcctga
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