KEGG   Rhodanobacter denitrificans: R2APBS1_1998
Entry
R2APBS1_1998      CDS       T02495                                 
Name
(GenBank) conjugative coupling factor TraD, SXT/TOL subfamily
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
rhd  Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rhd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhd02044]
    R2APBS1_1998
Secretion system [BR:rhd02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   R2APBS1_1998
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind T4SS-DNA_transf DUF87 AAA_22 AAA_10
Other DBs
NCBI-ProteinID: AGG89121
UniProt: M4NN44
LinkDB
Position
2145728..2147593
AA seq 621 aa
MSEPLIRQTYLNPFRPHFERAAGLAWMVAAALMVAEMFLPHASPRVLFVLAGVCAACAAP
WISKWLGLMLIRDRMNTRDVTIMPISEARKEFDPGGERIWIGWGFPWTSEESQLAREVAI
SDPSKLTPADSPEAPGQSWMHGIGATEEKIYLPVVDEHTLIIAMTRWGKTVLYRSLITQA
IARKEAVFVIDPKGDKGLQAACEQACRDMGKKLLVFHPGFPATSVRLDPLKNFTDSSEVA
SRISGLLGHGSRDNTFTAFAHMQLVNVVNGMLLAGKRPTLVAIKRYMDGHLESLLIDAIK
AYCDRVLAPGWERHLEGYRRSVLGRRKRRPDESDGPMLLTPEEDAAAYTAFYREQVLESK
GSPEIEGLIATVEHPAEHRSKMLTSLMPVLTKLTSGAMAKLMSTDATDPGDARLITDTAR
IVEQRQAIYIGLNALGNEDVANAIGEILMADIAAVCGTRYNYAKDKKVVSVLVDEAPEIL
NNNLIKLLNKGGGAGFRLTLATQTVSDIVARLGDKATAEKVLGNIANLIFGRVTAAESQE
YFCSRLPRVPIKSLGLSRSVTSPTSDPLDFSASQGETLRVEMEPPIEPPTLGCLPQLHFF
ALLGSRFVKGRIPVIVADAAE
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgagcgagcccctgattcggcagacctacctcaacccatttcgcccacatttcgagcgc
gcagctggcctcgcgtggatggttgcggcggcactgatggttgcggagatgttccttccg
cacgcttcaccgcgcgtgttgttcgtcctggctggtgtgtgcgctgcctgtgcggcaccg
tggatcagcaaatggcttggcctgatgttgatccgggaccggatgaacacgcgcgacgtg
actatcatgccgatcagcgaggcccgtaaggagttcgatcccggcggcgaacgcatctgg
atcgggtggggattcccatggacgagcgaggagtcgcagctggcgcgggaagtcgccatc
agcgacccgagcaaactgacgcctgccgattcccctgaggcgccgggccagtcgtggatg
cacggaatcggagccacggaggagaagatctatctacctgtcgtggatgagcacacgctg
atcattgcgatgacgcgatggggcaagacggtcctatatcgcagcctcattacccaggcg
atcgcacgcaaggaggccgtattcgtcatagacccgaagggtgacaagggcctgcaggcg
gcctgcgaacaggcgtgccgggacatggggaagaagctgctggttttccatcccggcttc
cccgcaacgtccgtgcggctggatccgctgaagaacttcacggactcgtcggaagttgct
tctcgaatctctggcctgcttggccacggctcgcgtgacaacacattcaccgcgtttgcc
cacatgcagctcgtcaacgtcgtcaacggcatgcttctggcgggaaagcgcccgacgctg
gtagccatcaagcgctatatggacgggcacctggaatcgcttctgattgatgcgatcaag
gcctactgcgaccgcgtcctggcccccggctgggaacggcatctggagggctacaggcgg
agcgttcttgggcggcgcaaaaggcggccggacgaatccgacggaccgatgctgttgacg
cctgaggaggatgctgcggcctacacggcgttctaccgtgaacaggttcttgagtcgaaa
ggtagccccgagatcgagggactgatcgcgacagtcgagcatccggcggagcatcgctcg
aagatgcttacgtcgctcatgccggtccttacgaaactgacgagcggagccatggcgaag
ctcatgtcgacggacgcgaccgaccccggcgacgctcgcctgatcacagacacggcgcgt
atcgtggagcagcgccaggcgatatacatcggcctgaacgccttgggcaacgaggacgtg
gcgaacgccatcggtgagatcctgatggccgacatcgcagcggtatgcggcacgcgatac
aactacgcaaaggacaagaaggtcgtgtcggtgctggtggacgaagcccccgagattttg
aacaacaacctcatcaagctgttgaacaagggcggcggcgctggcttccggctcaccctg
gcgacccagacggtttccgacatcgtggcgcgacttggcgacaaggccacggcggagaag
gtgctcggtaacatcgcgaacttgatcttcggccgcgtcaccgctgcggaatcccaggag
tacttctgcagtcgccttccacgcgtcccgatcaagtcgctgggcctcagccggtccgtg
accagccctaccagtgaccccctggacttttcggcatcccagggtgaaaccctcagggtg
gagatggagcccccgatcgaaccgccaacgctgggttgtctgccgcagctgcacttcttc
gcgctgctcggctcacgcttcgtgaagggtcggatccccgtcatcgtcgcggatgccgct
gaatga

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