Rhodanobacter denitrificans: R2APBS1_2018
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Entry
R2APBS1_2018 CDS
T02495
Name
(GenBank) autotransporter-associated beta strand repeat protein
Organism
rhd
Rhodanobacter denitrificans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S8
Autotransporter
PATR
ABHD18
Motif
Other DBs
NCBI-ProteinID:
AGG89141
UniProt:
M4NN62
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All DBs
Position
2166885..2169761
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AA seq
958 aa
AA seq
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MSILPNRRLLTVALATALSAALSACGGGGGGSNVRPTPPPPPPAPAPAPAPAPAPAPAPG
PTPSTDCASYAGIQCNQLTPANVVRAWAVGGTATSNQGQGVKVGILDTGADATNAGLTNR
ISWFKDYVTPSNTTPTDPNGHGTSIAEILGGVANPNGVINASTGTTAYPFEGGVAPQSSL
YIARVGDATGTFQSTLVPAALNDLMAQGVRLFNNSYGSTTAITSVTASDSTVQWDAQNLG
PIISGGGLMVFAAGNDGHSQPSIEAGLPYYVPTLQKGWLAVVNVALDGNGHVTGLATPTG
DASNACGVAAAWCLAAPGYDTFTPVANTEFKTGAGNGTSASAAVVSGVAALVWQRFPWMT
ANNVQETLLGTATALGDPALFGYGLVDAAAAVHGPGKFDWGVFDATVPSGTSATFSNAIS
GTGSLQLDGAGSLTLSGADTYSGGTVINGGTLSVDGSLASDVTVNAGGTLAGAGVIHANV
TNSGTVSTAGGALAIGGNYSPAATGNTAITIGTPLQVAGTATLNGSVVTATVPSTYTPKS
VEPLVQASVLTGTFGKLALTGSVYLGGTLSYTATEADVALSRTSIASVATQYMPALATTQ
QTAQHIEGALQQADEWAVNDPSGHAAFLAAANEFLHAASTPEAVASINSLSGQILASSQA
LTFAQAGIVNRTLANRLQDAHGGGSGAWVQGTGVSGDIARSGYATGSYDGGGAIAGYDTT
LGDQFTAGAALTWNRVASTYTLGAGSSSTRSEGVSLYGRYDTGTAYLAGRIGRDWVRADV
NRWGLLGTQSAAIQSDRQDHLTAAYAEAGYALHGSFDVTPFVGIDAARLRRGAIDEQGAG
GFGIAAGAHTFDQTAGILGARLGRVWSSDDGQISVQGYALWKHLFSGQSLGFTAAYAGAP
DATFTLEGVNAPSNSGWVGIGIAADRGNGWSWFGNVDGQVAGHGTKAAAVSAGVRYRF
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcctgcccaatcgtcgtctcctcaccgttgctttggccaccgccctgtccgcc
gcgctgagcgcgtgcggcggtggcggtggcggcagcaacgttcggccgacccccccgcct
ccgccgccggctccggctcctgcgccggcccctgcgcccgcaccggcccccgctcccggc
ccgacgccgtcgacggactgcgcgagctacgcaggcatccagtgcaaccagctcaccccg
gccaatgtcgtcagagcatgggcggtcggcggcacggcgacgagcaatcagggtcagggc
gtgaaggtcggcatcctggataccggtgcggacgccacgaacgccggtctgaccaaccgc
atcagttggttcaaggactatgtgacgccgagcaacaccacgccgaccgatccgaacggc
cacggcacgtcgatcgccgagatcctcggtggcgtcgccaacccgaacggtgtcatcaac
gcttcgactggcacgacggcgtatccgttcgagggcggcgttgcgccgcagtccagtctc
tacatcgcccgtgtgggcgatgccaccggcacgttccagagcaccctcgttcccgccgca
ctgaacgacctgatggcccagggcgtgcgcctgttcaacaactcctatggttcgacgacg
gcgatcaccagcgtcacggcatccgacagcaccgtgcagtgggacgcgcagaacctcggc
ccgatcatcagcgggggcggcttgatggtgtttgccgccggcaacgatggacattcgcag
cccagcatcgaagcgggcctgccgtactacgtgcccacgctgcaaaagggttggctggcc
gtggtcaacgtcgcgctggacggcaacgggcacgttacgggcctggccacgcccacgggt
gatgcgtccaacgcttgcggcgttgctgccgcctggtgccttgccgcgcctggctacgac
actttcacgccggtggccaacacggagttcaagacgggcgcaggcaacggcacgtcggca
tccgcggcggtcgtgtcgggcgtggccgcgctggtgtggcagcggttcccgtggatgacg
gccaacaacgtgcaggaaaccctgctgggtacggccaccgcactgggtgatccggctctg
ttcggctacggcctggtcgacgccgcggcggcggtccatggtccgggcaagttcgactgg
ggcgtgttcgacgccaccgtgccctcgggcacgtccgccaccttctccaacgcgatcagc
ggcaccggcagcctgcagctcgacggcgccggctcgctcaccttgtccggtgccgacacc
tactcgggtggcaccgtgatcaatggcggcacgctgtcggttgatggctcgctggcctcg
gatgtgaccgtcaacgctggcggcactctcgccggtgctggcgtcatccatgccaacgtc
accaacagcggaacggtcagcaccgcgggcggcgcgctggcgatcggcggcaactattcg
ccggcggcgacgggcaacaccgccatcacgatcggcacgcccctacaggttgcgggcacg
gccacgctcaatgggtccgtggtgacggccactgtgccgtccacctacacgcccaagagc
gtggagccgctggtgcaggccagcgtgcttaccggcacgttcggcaagctggccttgacc
ggaagcgtctacctgggcggcacgctgtcctacacggcgacggaagctgatgtcgcgctg
tcgcgaacctcgatcgccagtgtcgccacgcagtacatgccggcgctggctaccacgcag
cagaccgcccagcacatcgagggcgcgctgcagcaggcggacgagtgggcggtcaacgat
ccgtccggccacgcggcgttccttgcggcggccaatgagttcctccatgcggcttcgacg
cccgaagctgtcgcctcgatcaacagcctgtccggccagatcctcgcatcgtcgcaggct
ctcaccttcgcgcaggcgggcatcgtcaaccgtaccctggccaatcgtctgcaggacgcg
cacggcggcgggagcggggcatgggtgcagggcactggcgtgagcggcgacatcgcgcgc
agcgggtatgcgacgggcagctacgacggcggtggcgccatcgccggctacgatacgacg
ctcggtgaccagttcaccgcgggcgcggcgctgacctggaaccgcgtggcgtcgacctac
acgctgggtgctggcagcagcagcacgcgcagcgagggcgtctcgctctacggtcgctat
gacacgggcaccgcgtaccttgccggccgtatcgggcgggactgggtgcgggcagacgtc
aaccgctggggcctgctcggtacgcagagtgctgcgatccagagtgaccggcaggaccac
ctgaccgcggcctacgccgaggctggctatgccttgcacggctcattcgatgtcacgccc
ttcgtcggtatcgacgcggcacgcctgcgccgtggcgcgatcgacgagcagggcgcgggt
ggcttcggcatcgctgccggcgcgcacaccttcgaccaaaccgccggcatcctgggcgcc
cggctcggccgcgtgtggtcctccgacgatggacagatcagcgtgcagggctatgccctg
tggaagcacctgttcagtggccagtccctcggcttcaccgcggcctacgcgggcgccccg
gatgccaccttcacgttggagggcgtcaacgcgccgagcaacagcggatgggttggcatc
ggcatcgctgccgatcgcggcaacggctggtcgtggttcggcaacgtggacggtcaggtg
gctggccacggcaccaaggcggccgctgtgagcgcaggcgtgcggtatcgcttctag
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