Rhodanobacter denitrificans: R2APBS1_2234
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Entry
R2APBS1_2234 CDS
T02495
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
R2APBS1_2234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhd03019
]
R2APBS1_2234
03009 Ribosome biogenesis [BR:
rhd03009
]
R2APBS1_2234
03036 Chromosome and associated proteins [BR:
rhd03036
]
R2APBS1_2234
Enzymes [BR:
rhd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
R2APBS1_2234
Messenger RNA biogenesis [BR:
rhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
R2APBS1_2234
Ribosome biogenesis [BR:
rhd03009
]
Eukaryotic type
90S particles
RNase
R2APBS1_2234
Prokaryotic type
rRNA processing factors
R2APBS1_2234
Chromosome and associated proteins [BR:
rhd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
R2APBS1_2234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AGG89342
UniProt:
M4NGX1
LinkDB
All DBs
Position
complement(2398279..2398938)
Genome browser
AA seq
219 aa
AA seq
DB search
MEPNYRFRDPTLAQLALTHRSVGKPNNERLEFLGDALLGAIVAEMLYEAHPRASEGELSR
LRAQLVNGQALAVVARELDLGDGLKLGPGELKSGGFRRDSILADAFEAMVAAVYQDGGFD
ACREFVRGLFAERIAALRRSSKDAKTRLQEWLQAKGLPLPHYELVASHGEDHAKTFEVSC
SIGEPIAFTAEAHGGSRRAAEQDAAEAVLNQLLEQQRDA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
ttggaaccgaactaccgttttcgcgacccgacgctggcgcagctggcactgacccaccgc
agcgtcggcaaaccgaacaacgagcggctggagttcctcggtgatgcgctgctcggcgcg
atcgtcgccgagatgctttacgaagcgcatccccgggccagcgaaggcgagctgtcgcgg
ctgcgcgcgcaactggtcaatggacaggcgctggccgtggtggcccgtgaactggacctg
ggcgacgggctgaagctcggcccgggcgaattgaagagcggtggcttccgacgcgattcg
atcctcgccgacgcgttcgaggcgatggtcgccgcggtctaccaggatggcggcttcgat
gcctgccgcgagttcgtgcgcgggctgttcgccgagcgcatcgccgccttgcgccgctcc
tccaaggacgccaagacgcggttgcaggagtggctgcaggccaagggtctgccgctgccg
cactacgaactggtggccagccacggcgaggaccacgccaagaccttcgaggtcagctgc
agcatcggcgagccgatcgcattcaccgccgaagcccatggcggcagccgccgcgccgcg
gagcaggacgcggccgaggccgtgctcaaccagctgctggagcagcagcgcgacgcctga
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