Rhodanobacter denitrificans: R2APBS1_2257
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Entry
R2APBS1_2257 CDS
T02495
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd03030
DNA replication
rhd03430
Mismatch repair
rhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R2APBS1_2257
03430 Mismatch repair
R2APBS1_2257
03440 Homologous recombination
R2APBS1_2257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhd03032
]
R2APBS1_2257
03400 DNA repair and recombination proteins [BR:
rhd03400
]
R2APBS1_2257
Enzymes [BR:
rhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R2APBS1_2257
DNA replication proteins [BR:
rhd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R2APBS1_2257
DNA repair and recombination proteins [BR:
rhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R2APBS1_2257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF1611_N
T2SSG
Motif
Other DBs
NCBI-ProteinID:
AGG89361
UniProt:
I4WR67
LinkDB
All DBs
Position
complement(2422012..2422719)
Genome browser
AA seq
235 aa
AA seq
DB search
MRQIVLDTETTGLEVRQGHRLVEIACVELVERRLTGRHYQTYLNPDRAIDEGARLVTGIE
DEFLLDKPRFAEVAEEFLAFIDGAELIIHNASFDIGFLDAELARLGNAAGRIGDRCSVLD
TLAMARERYPGQRNSLDALCKRLGVDNSRRDLHGGLIDAQLLADVYLAMTSGQVAFDLGF
EGAAEQRDVMVMVPAVLHARPRVLRASAEEISAHEQRLAALDKSSADGQSVWRRL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagatcgttctcgataccgaaaccaccggcctggaagtgcgccagggccatcgc
ctggtggaaatcgcctgtgtcgaactggtcgagcgccggcttaccggccggcactaccag
acctacctgaacccggatcgggcgatcgacgagggcgcccggctggtcaccggcatcgaa
gacgagttcctgctcgacaagccgcgctttgccgaggtggcggaggagttcctggccttc
atcgacggcgccgagctgatcatccacaacgccagcttcgacatcggcttcctcgacgcc
gaactggcccgactgggcaatgccgcgggccggatcggcgaccgctgcagcgtgctggat
accctggcgatggcgcgcgagcgctacccggggcagcgcaacagcctcgatgccctgtgc
aagcggttgggtgtggacaactcgcggcgcgatttgcacgggggcctgatcgacgcgcaa
ctgctggccgacgtgtacctggcgatgacttcggggcaggtggcgttcgacctgggcttc
gagggcgccgccgagcagcgcgatgtgatggtgatggtaccggcggtgctgcatgcgcgg
ccacgtgtgctgcgtgcatcggcagaggagatatcggcgcacgagcagcgcctggccgcg
ctggacaagagcagtgcggatgggcagagcgtgtggcggcggttgtga
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