Rhodanobacter denitrificans: R2APBS1_2285
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Entry
R2APBS1_2285 CDS
T02495
Name
(GenBank) tRNA pseudouridine synthase, TruD family
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
rhd
Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhd03016
]
R2APBS1_2285
Enzymes [BR:
rhd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
R2APBS1_2285
Transfer RNA biogenesis [BR:
rhd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R2APBS1_2285
Prokaryotic type
R2APBS1_2285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGG89381
UniProt:
M4NNZ0
LinkDB
All DBs
Position
complement(2443692..2444702)
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AA seq
336 aa
AA seq
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MQELPHAFGEPPLTARLRSAPEDFQVEEILGYDADGAGEHALLWVEKRGANTDWVARELA
KFAGVPPVAVGYAGLKDRHAVTRQTFSVQLAGKPDPDWSAFPHAEVKVLAATRHSRKLKR
GALRGNRFVLVLREVQGDRGAAEQALQQIAARGVPNYFGEQRFGREGGNVAQARAMFGGR
RVDRDQRSFLLSAARSQIFNSVLAARVERGAWDSPLDGEIWSLAGSRSWFGPEPFNAVLA
ERLARADIHPSGPLWGQGEPPSQGEAGALEREIGAANDDLAAGLAAARMDQERRPLRLLP
KDLRRRWLGDDALELSFELPAGAYATVVVREVASIA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagaacttccccacgccttcggcgaaccgccactgaccgcccgactgcgcagcgcg
ccggaggacttccaggtcgaggagatcctcggctacgacgccgacggtgccggcgaacac
gccctgctgtgggtggagaagcgcggcgcgaataccgactgggtggcgcgagaactggcg
aagttcgccggcgtgccgccagtcgcggtgggctacgcagggctgaaggatcgccacgcg
gtgacccggcagaccttctccgtgcagctggcgggcaagcccgacccggactggtcggcg
ttcccgcacgcggaagtgaaggtgctggcggcgacgcggcattcgcgcaaactgaagcgc
ggcgcattgcgcggcaaccgcttcgtgcttgtgctgcgcgaggtgcagggcgaccgcggc
gcggcggaacaggcgctgcagcagatcgccgcgcgcggcgtgccgaactatttcggcgaa
cagcgcttcggccgcgagggcggcaacgtggcgcaggcgcgggcgatgttcggcgggcgt
cgcgtggatcgcgaccagcgctcgttcctgttgtccgcggcgcgttcgcagatcttcaac
agcgtgctggcggcacgggtcgaacgcggcgcctgggacagcccgctggatggcgagatc
tggtcgctggccggctcgcgctcgtggttcgggccggaaccgttcaacgcggtgctggcc
gaacggctggcccgcgccgacatccatccgtccggcccgttgtgggggcagggcgagccg
ccgagccagggcgaggcgggcgcgctggagcgcgagatcggcgcggcgaacgacgacctg
gccgccggcctggcggcggcgcggatggaccaggaacgccgcccgctgcggctgctgccg
aaggacctgcgccggcgctggctgggcgacgacgcgctggaactgtcgttcgagctgccg
gccggcgcgtacgccacggtggtcgtgcgcgaagtggcctcgatcgcgtag
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