Rhodanobacter denitrificans: R2APBS1_2635
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Entry
R2APBS1_2635 CDS
T02495
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
R2APBS1_2635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhd03400
]
R2APBS1_2635
DNA repair and recombination proteins [BR:
rhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
R2APBS1_2635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
AGG89717
UniProt:
M4NHY6
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Position
2795822..2798506
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AA seq
894 aa
AA seq
DB search
MSQDDLTKHTPFMRQYLSAKAAHPDVLLFFRMGDFYELFYDDARKAARLLDITLTQRGQS
GGAPIPMAGVPYHAAENYLARLVRLGESVAICEQMGDPALAKGIVERKVVRVVTPGTVTD
AALLEERRDNLLLAIATGAHGAYGLAWVDLSSGRFLLSEVPNAEALAAELARLQPAETLV
GEDVAWPKLVSALPGLRKRPPWHFDGDAAKRGLNRFFGTRDLGGFGVDKLPLAVAAAGCL
LGYVEETQKSALPHLTGMAVESASETIALDAATRRNLELDTHPSGRTEHTLLGVLDETVT
PMGARALRRWLTRPLRSREVLRQRHQAIGMLIDGRRGEMLRETLRGIGDLERILARVALR
SARPRDLSTLRDGLLAAPELTRALVPDRENQEAGVASAIIPDRGNQKAAIHGRTLQESLG
PLLHALVERIGNHADTAALLARAVVEQPPVLQRDGGVIADGYDAELDELRRLSTHADQFL
VELEEREKAASGITTLKVGYNRVHGYYIEITRAQSDKAPTHYTRRQTTKNAERYITEELK
AFEDKVLSAKERSLMRERALYEALLDTLTEKLEPLRTAAAAMAELDVLATLAERAEALDW
NAPQLTDEPGIAIERGRHPVVEKVRDEPFEPNDLKLDDTRRMLVITGPNMGGKSTYMRQN
ALIVLLAHIGSYVPASRAVIGPIDRIFTRIGAGDDLSRGQSTFMVEMSETANILHNATAD
SLVLMDEVGRGTSTYDGLSLARAAAVHLARHSRAYTLFATHYFELTELANEFAAIANVHL
DAVEYHDKKQGEQLVFMHAVKEGPANRSFGLQVAALAGLPKSVIADAKRTLAELERGMHL
HASTPAPAAESSPQLGLFAPAQPSAAERMLEAIDPDALSPREALELLYRLKRSG
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagacgatctcaccaagcacaccccgttcatgcgccagtacctgtcggccaag
gccgcgcacccggacgtgctgctgttcttccgcatgggcgatttctacgagctgttctac
gacgacgcccgcaaggcagcgcggctgctcgacatcaccctgacccagcgcgggcagtcg
ggcggcgcgccaatcccgatggccggggtgccgtatcacgcggcggaaaattatctggcg
cggctggtgcgcctcggcgaatcggtggcgatctgcgaacagatgggcgacccggcgctg
gccaagggcatcgtcgagcgcaaggtggtgcgcgtggtcacgcccggcacggtgaccgac
gccgcgctgctggaggaacgccgcgacaacctgctgctggcgatcgccaccggtgcgcac
ggcgcctacgggctggcctgggtcgacctgtccagcggccgtttcctgctcagcgaagtg
cccaacgccgaggcgctggccgccgagctggcgcggctgcagccggccgagaccctggtc
ggcgaggacgtggcgtggccgaaactggtcagtgccctgcccggcctgcgcaagcgcccg
ccgtggcacttcgacggcgatgccgcaaaacgcgggttgaaccgcttcttcggcacccgc
gacctcggcggcttcggcgtggacaagctgccgctggcggtcgctgccgccggttgcctg
ctcggctacgtcgaggaaacccagaaaagcgcgctgccgcacctcaccggcatggcggtg
gaaagcgccagcgagacgatcgcgctggacgcggccacgcgccgcaacctggaactggac
acccaccccagcggccgcaccgaacataccctgctcggcgtgctcgacgagacggtgacg
ccgatgggcgcgcgagcgttgcggcgctggctgacccggccactgcgctcgcgcgaggtg
ctgcgccagcgccaccaggcgatcggcatgctgatcgacggccgccgcggcgagatgctg
cgcgaaacgctgcgcggcatcggcgacctggagcgcattctcgcccgcgtcgcgctacgc
tcggcgcggccgcgcgacctgtctacgctcagggacggcctgctggccgcccctgagctc
actcgtgcgctcgtccctgatcgcgaaaatcaagaagcgggagttgccagtgcgatcatc
cctgatcgcggaaatcaaaaagcggccatccatggccgcactcttcaagaaagcctcggc
ccattgctgcacgcactggtcgaacgcatcggcaaccacgcggatacggcggccttgctc
gcccgtgccgtggtcgaacagccgccggtgctgcagcgcgacggcggcgtgatcgccgac
ggctacgacgccgaactcgacgaactgcgccggctgtccacccacgccgaccagttcctg
gtcgagctggaggaacgcgagaaagccgccagcggcatcaccacgctgaaggtcggctac
aaccgcgtgcacggctactacatcgagatcacccgcgcgcagtcggacaaggcgcccacg
cattacacgcgccggcagaccacgaagaacgccgagcgctacatcaccgaggaactgaag
gcgttcgaggacaaggtgctgtcggcgaaggagcgctcgctgatgcgcgagcgcgcgctg
tatgaggcgctgctggacacgctgaccgagaaactcgaaccgctcagaaccgctgctgcc
gcgatggccgagctggacgtgctggccaccctggccgagcgcgccgaggcgctcgactgg
aacgccccgcaactcaccgacgagcccggcatcgcgatcgagcgcggccgccatccagtg
gtcgagaaagtccgtgacgagccgttcgagccgaacgacctgaagctcgacgacacccgc
cgcatgctggtgatcaccggcccgaacatgggtggcaagtccacctacatgcgccagaac
gcgctgatcgtgctgctcgcgcacatcggcagctacgtaccggcgtcgcgcgccgtgatc
ggcccgatcgaccgcatcttcacccgcatcggcgccggcgacgacctctcgcgcggccag
tccaccttcatggtggaaatgagcgagacggccaacatcctgcacaacgccaccgccgac
agcctggtgctgatggacgaggtcggccgcggcaccagcacctacgacggcctgtcgctg
gcccgcgccgccgccgtgcatctggcgcgccacagccgtgcctacacgctgtttgccacc
cactacttcgagctcaccgaactggccaacgagttcgcggcgatcgccaacgtgcatctg
gacgccgtggaatatcacgacaagaagcagggcgagcagcttgtgttcatgcacgcggtg
aaggaaggcccggcgaaccgcagcttcggcctgcaggtggccgcgctggccggcctgccg
aaatcggtgatcgccgacgccaaacgcaccctggccgaactcgagcgcggcatgcacctg
cacgccagcacgcccgcgccggccgccgagtcctcgccgcaactgggcctgttcgccccc
gcgcagccttccgccgccgagcggatgctggaagcgatcgacccggatgcgctgagcccg
cgcgaagcgctggaactgctgtaccgcctgaaacgatcgggctga
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