Rhodanobacter denitrificans: R2APBS1_3193
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Entry
R2APBS1_3193 CDS
T02495
Name
(GenBank) hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00020
Citrate cycle (TCA cycle)
rhd00620
Pyruvate metabolism
rhd00720
Other carbon fixation pathways
rhd01100
Metabolic pathways
rhd01110
Biosynthesis of secondary metabolites
rhd01120
Microbial metabolism in diverse environments
rhd01200
Carbon metabolism
Module
rhd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhd_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
R2APBS1_3193
00620 Pyruvate metabolism
R2APBS1_3193
09102 Energy metabolism
00720 Other carbon fixation pathways
R2APBS1_3193
Enzymes [BR:
rhd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
R2APBS1_3193
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
AGG90264
UniProt:
M4NH83
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All DBs
Position
complement(3351289..3352806)
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AA seq
505 aa
AA seq
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MTAIKQADLIQSVADALQYISYYHPVDYIKSLAAAYEREESPAAKDAMAQILINSRMAAE
GHRPLCQDTGIVTVFLKVGMNVRWDDATMSLEDMANEGVRRAYLDPDNKLRASVLADPAG
KRVNTKDNTPSVVNMSIVPGDTVEVIVAAKGGGSEAKSKFAMLNPSDSIVDWVLKTVPTM
GAGWCPPGMLGLGIGGTAEKAMLMAKEALMESIDIQELIARGPANRAEELRIELYEKVNA
LGIGAQGLGGLTTVLDVKVKDFPTHAANLPVAMIPNCAATRHAHFVLDGSGPVMLDPPSL
EDWPKLTYDASKGRRVNLDTVTRDDVAGWKPGETLLLNGKLLTGRDAAHKRMVEMLDRGE
PLPVDFNGRFIYYVGPVDPVREEVVGPAGPTTATRMDKFTEQVLAQTGLLGMVGKAERGP
AAIEAIKKHRSVYLMAVGGAAYLVSKAIKASRVVGFADLGMEAIYEFTVEDMPVTVAVDS
GGSSVHQTGPREWQARIGKIPVFIK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccatcaaacaagcagacctgatccagtccgtcgccgacgcgctgcagtacatc
agctactaccacccggtcgactacatcaagagcctcgccgccgcgtacgagcgcgaggag
tcgcccgccgcgaaggatgcgatggcgcagatcctgatcaactcgcggatggccgccgaa
ggccaccggccgctgtgccaggataccggcatcgtcaccgtgttcctgaaagtgggcatg
aacgtgcgctgggacgacgccaccatgagtctggaggacatggccaacgaaggcgtgcgc
cgcgcgtacctggacccggacaacaagctgcgcgccagcgtgctggccgacccggcgggc
aagcgcgtcaacaccaaggacaacacgccgtcggtggtcaacatgtcgatcgtgccgggc
gacacggtcgaggtgatcgtggcggccaagggcggcggctccgaggcgaagtcgaaattc
gccatgctcaacccgtccgactcgatcgtcgactgggtgctgaagaccgtgcccaccatg
ggcgccggctggtgcccgccgggcatgcttgggctgggcatcggcggcaccgccgagaag
gcgatgctgatggcgaaggaggcgctgatggagtcgatcgacatccaggaactgatcgcg
cgcggccccgccaatcgcgccgaggaactgcgcatcgagctgtacgagaaggtcaacgcg
ctgggcatcggcgcgcagggcctgggcggcctgaccaccgtgctcgacgtcaaggtgaag
gatttcccgacccacgcggcgaacctgccggtggcgatgatcccgaactgcgccgccacc
cgccacgcgcacttcgtgctggacggctccggcccggtgatgctcgacccgccgtcgctg
gaggattggcccaagctcacctacgacgcgtccaagggccgccgggtgaacctcgacacc
gtgacccgggacgacgtcgccggctggaaaccgggcgagaccctgctgctcaacggcaag
ctgctcaccggccgcgacgccgcgcacaagcgcatggtcgagatgctcgaccggggcgag
ccgctgccggtggatttcaacggccgcttcatctactacgtcggcccggtcgatccggtg
cgcgaggaggtggtcggcccggccggcccgaccaccgccacgcgcatggacaagttcacc
gagcaggtgctggcgcagaccggcctgctcggcatggtcggcaaggccgagcgcggcccc
gccgcgatcgaggcgatcaagaagcaccgctcggtgtacctgatggccgtgggcggcgcc
gcgtacctcgtttccaaggcgatcaaggcctcgcgcgtggtcggcttcgcggacctgggc
atggaggcgatctacgagttcaccgtcgaggacatgccggtgaccgtggcggtcgactcg
ggcggcagctcggtgcaccagaccggcccgcgcgaatggcaggccaggatcggcaagatc
cccgtgtttatcaagtaa
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