Rhodanobacter denitrificans: R2APBS1_3232
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Entry
R2APBS1_3232 CDS
T02495
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00730
Thiamine metabolism
rhd00900
Terpenoid backbone biosynthesis
rhd01100
Metabolic pathways
rhd01110
Biosynthesis of secondary metabolites
Module
rhd_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
R2APBS1_3232
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
R2APBS1_3232
Enzymes [BR:
rhd01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
R2APBS1_3232
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
TPP_enzyme_C
E1_dh
Transketolase_N
DUF7317
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AGG90302
UniProt:
M4NJM1
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All DBs
Position
3395231..3397120
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AA seq
629 aa
AA seq
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MNDLSHYPHLAPIETPADLRRVGDEDLPAVADELRQYLIESVASSGGHFGAGLGVVELTV
ALHHEFDTPHDRLVWDVGHQCYPHKILTGRRDRITTIKKKDGLAPFPRREESAYDTFGVG
HSSTSISAALGMAIAAQRKGDKRKVVAVIGDGAMTAGMAFEALNHGGDVEPDMLVVFNDN
GMSISENVGAMTKMMARAMASRRLNQLRERAKRAIPKQSFAGRWFKRWEEHAKGMFVPST
LFEELGFHYTGPIDGHNIPQLLQALRTVKNLPGPQLLHVITTKGKGYAPAEQAQIEYHAV
GPFDPEAGVVKKPAPARPTYTDIFSDWLCDQAAADERLLGITPAMREGSGLVRFSKEYPE
RYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQAIHDVALQNLDVTFAIDRA
GVVGPDGATHSGSFDLTYLRCLPNMVIMAPADENECRMMLSSGFHHHGPAAIRYPRGTGP
GVAIHQELDTLPIGKAELRRRGHGLALLSFGAMLAPAAAIAAEFDATLVNMRFVKPLDEA
LLVELAKTHDGFVTLEDNAVAGGAGSAVAECLAAHGIVLPILHLGLPDVYLEHGSREEVL
SMAGLDLPGIRHAIRARFPQAGALSQASA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctttcccattacccccacctggcgccgatcgagacgccggccgacctgcgc
cgcgtgggcgacgaggatctgcccgccgtcgccgacgagctgcgccagtacctgatcgaa
tccgtggccagctccggcggccatttcggcgccggtctgggcgtggtggaattgaccgtg
gcgctgcaccacgaattcgacacgccgcacgaccgcctggtgtgggacgtcggccaccag
tgctacccgcacaagatcctcaccggccgccgcgaccgcatcaccacgatcaagaagaag
gacggcctggcgccgttcccgcgccgcgaggaaagcgcgtacgacaccttcggcgtcggc
cattcgtccacttcgatctcggccgcgctgggcatggcgatcgccgcgcagcgcaaaggc
gacaagcgcaaggtggtggccgtgatcggcgacggcgcgatgaccgccggcatggcgttc
gaggcgctcaaccacggcggcgacgtcgagccggacatgctcgtcgtgttcaacgacaac
ggcatgtcgatcagcgagaacgtgggcgcgatgaccaagatgatggcgcgcgcgatggcc
agccgccgcctcaaccagctgcgcgagcgggccaagcgggcgatcccgaagcagtccttc
gccggccgctggttcaagcgctgggaggagcacgccaagggcatgttcgtgccttccacg
ctgttcgaggagctgggcttccattacaccggcccgatcgacggccacaacatcccgcag
ctgctgcaggcactgcgcacggtgaagaacctgcccggcccgcagctgctgcacgtgatc
accaccaagggcaagggctatgccccggccgaacaggcgcagatcgaataccacgcggtg
ggtccgttcgatcccgaagccggcgtggtcaagaagcctgcgccggccaggcccacctac
accgacatcttcagcgactggctgtgcgaccaggccgccgccgacgagcgcctgctcggc
atcaccccggcgatgcgcgaaggctccggcctggtgcgtttctcgaaggagtaccccgag
cgctacttcgacgtggcgatcgccgagcagcacgcggtgacgctggccgccggcatggcc
tgcgaaggcgccaaaccggtggtggcgatctactccaccttcctgcagcgcgcctacgac
caggcgatccacgacgtggcgctgcagaacctcgacgtcaccttcgccatcgaccgtgcc
ggcgtggtcggcccggacggcgccacccattcgggcagcttcgacctgacctatctgcgc
tgcctgccgaacatggtcatcatggcgccggccgacgagaacgagtgccgcatgatgctc
tcctccggcttccaccatcacggccccgccgccatccgctacccgcgcggcaccggcccc
ggcgtggcgatccaccaggaactcgacaccctgccgatcggcaaggccgagctgcgccgg
cgcggccacggcctggccctgctcagcttcggcgcgatgctggcacccgccgccgcgatc
gccgccgaattcgacgccaccctggtcaacatgcgcttcgtgaagccgctggacgaggcg
ctgctggtggaactggcgaagacccatgatggcttcgtcaccctggaagacaacgcggtc
gccggcggcgccggctccgccgtggccgaatgcctcgccgcgcacggcatcgtgctgccg
atcctgcacctgggcctgccggacgtctatctggaacacggcagccgcgaggaagtgctg
agcatggccggactggacctgcccggcatccgccacgcgatccgtgcgcgcttcccgcag
gcgggagccttgagccaggccagcgcctga
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