Rhodanobacter denitrificans: R2APBS1_3272
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Entry
R2APBS1_3272 CDS
T02495
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00300
Lysine biosynthesis
rhd00550
Peptidoglycan biosynthesis
rhd01100
Metabolic pathways
rhd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R2APBS1_3272
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R2APBS1_3272
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
R2APBS1_3272
Enzymes [BR:
rhd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
R2APBS1_3272
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AGG90340
UniProt:
M4NHA6
LinkDB
All DBs
Position
complement(3448267..3449649)
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AA seq
460 aa
AA seq
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MMQLAAIALWTHGRLLGADVEVTGVAIDTRRLEPGDLFVAIKGERADGHDYLAEAATRGA
VAALVTRKVDSALPQVLVGSTELALGDLASAVRAQRNVRVVGITGSNGKTTVKTLVASIL
ARHGRTHVSAGNFNNELGLPLSLLAMPPDTEYAVFEMGAGKPGDIAYLAAIARPDIGLVT
LIAPAHLARMGSIEGVAETKGALYQALPADGVAIINADDAFASFFTGLAGARKVLRFGLE
QPADIGAGIVEQRVDGSRFVLHTPQGDAGVALPLPGRHNIANALAATAVALALEVPLATI
VAGLEQVPGVAGRLRRETMAGGWTLIDDSYNANPGSMAAAIDTLLLAAGERWLVLGDMAE
LGTDAPALHAGIGTRARERGVERLFAVGPFGTATVEAFGAGGTHFDDKVALIAALRTQLH
AGVTCLVKGSRSAGMEQVVAALGGHPGTAGKNEGGASDAA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagctcgccgccatcgcgctgtggacccacggccgcctgctcggcgccgacgtc
gaggtgaccggcgtcgccatcgacacgcgcaggctcgagcccggcgacttgttcgtggcg
atcaagggcgagcgggctgatggccacgattacctggccgaagccgccacgcgcggcgcg
gtcgccgcgctggtcacgcgcaaggtcgacagcgcgctgccgcaggtactggtgggcagc
accgaactggccctcggcgacctggccagcgcggtgcgcgcgcagcgcaacgtgcgcgtg
gtcggcatcaccggctccaacggcaagaccacggtgaagacgctggtcgcctcgatcctg
gcgcggcacggccgcacccacgtcagcgcgggcaacttcaacaacgagctgggcctgccg
ctgagcctgctcgcgatgccgccggacaccgaatacgcggtattcgagatgggcgccggc
aagccgggtgacatcgcctacctggctgccatcgcgcggcccgatatcggcctcgtcacg
ctcatcgcgccggcgcatcttgcgcgcatgggcagcatcgaaggcgtggccgagaccaag
ggcgcgctgtaccaggcgttgccggccgacggcgtggcgatcatcaatgccgacgacgcg
ttcgccagcttcttcaccggcctggccggcgcgcgcaaggtgctgcgcttcggcctggag
caaccggccgacatcggcgccggcatcgtcgagcaacgcgtggacggctcgcgtttcgtg
ctgcatacgccgcaaggcgacgccggggtggcgctgccactgcctggccgccacaacatc
gccaacgcgctggcggcgacggcggtagcgttggcgcttgaggtgccgctggccaccatc
gtggccgggctggagcaggtgcccggcgtggccggccgcctgcgccgcgagacgatggcc
ggcggttggaccctgatcgacgacagctacaatgcgaaccccggctcgatggcggcagcg
atcgacaccctgctgctggccgccggcgaacgctggctggtgctgggcgacatggccgag
ctgggcacggatgcgcccgcattgcatgccggcatcggcacgcgtgcgcgcgagcgcggg
gtcgagcggctgttcgcggtgggcccgttcggcacggccacggtcgaggcgttcggcgcc
ggcggcacgcatttcgacgacaaggtcgcgttgatcgccgcgctgcggacgcagctgcac
gcgggcgtcacctgcctggtgaagggttcgcgctcggccggcatggagcaggtggtggcg
gcgctcggcggtcatccgggcacggcgggcaagaacgaagggggtgcgtccgatgctgct
tga
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