Rhodanobacter denitrificans: R2APBS1_3345
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Entry
R2APBS1_3345 CDS
T02495
Name
(GenBank) penicillin-binding protein, 1A family
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00550
Peptidoglycan biosynthesis
rhd01100
Metabolic pathways
rhd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R2APBS1_3345
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R2APBS1_3345
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rhd01003
]
R2APBS1_3345
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhd01011
]
R2APBS1_3345
Enzymes [BR:
rhd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
R2APBS1_3345
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
R2APBS1_3345
Glycosyltransferases [BR:
rhd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
R2APBS1_3345
Peptidoglycan biosynthesis and degradation proteins [BR:
rhd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
R2APBS1_3345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PCB_OB
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AGG90409
UniProt:
M4NHN1
LinkDB
All DBs
Position
3535230..3537758
Genome browser
AA seq
842 aa
AA seq
DB search
MQIFKRLLRWALVLAFSGLLLAVVAVGVAYWLIAPRLPSVAELKNYPMQVPLRVLSADGK
LIASFGETRRIPVDIGNVPDRLKHAVLSAEDADFYHHPGVDWHGIARAGWHVLVTGGDKG
PGGSTITQQVARNFFLSPEKLYSRKLTEIFIALRIEHELSKDQILELYLNKMFLGHRSYG
VAAAAEYYYGKTLDQLTVAECALIASTFQLPSAVNPINSPKRAMARRNWVLGEMLRHDYI
TRAVYEQAIAEPNHAYPHEQPIEVDAPYLAEMVRRQVLDRFGNDALTEGYVVRTTLQSSR
QQAAVEALRDGLVAYDRRHGWRGPEAHQDLPAGAGEADLDGLLSAYASVSGMQPGVVTAS
DAKQATVYLSSRESVILDLAAVSWARPHISDDRVGAAPTRVDGVLKRGDIIRLARDDKGE
WQLAQIPEAQAALASIAPEDGSIQALVGGFNFVRSKFNRAVMAARQPGSSFKPYLYSAAF
ERGFTPASIINDAPLALPDPSRPNGIWTPSNDDDKFAGPMRLREALVQSKNLVSVRLLDA
VGVRYMREYATRFGFSQDAMPANLSMALGTASVSPMGMARGYAVFANGGYLVTPYFIHEI
DDRTGQAVYVANPARACRNCQERLLDTQPPGPPPAGMNPTPANNLASTSSAAPAESSSID
GVGDAVLPADAHGDGAHPPVLAPHVIEARNDYLVTSLMKDVILRGTGSAARALGRDDLAG
KTGSTNDHRDAWFVGFDGELSTAVWVGFDNYNSLGRGEFGARAALPIWMSYMGSVLKGQP
SSTLPMPPGISTVWINRDSGLPASSDDPDGINEMFKVEDVDRLRSQAAQQKEQDQQHAYD
IF
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattttcaaacgcttgctgcgctgggctctggtcctggccttttccggtttgctc
ctggcagttgtcgcggtaggtgtggcgtattggctgatcgccccgaggctcccctcggtg
gccgaactgaagaactacccgatgcaggtgccgctgcgcgtgctgagcgccgacggcaag
ctgatcgccagcttcggcgagacccggcgcatcccggtggatatcgggaacgtgccggac
cggctcaagcacgccgtgctgtcggccgaggacgcggacttctaccaccaccccggcgtg
gactggcacggcatcgcgcgcgccggctggcatgtgctggtaaccggcggcgacaagggc
cccggcggctccaccatcacccagcaggtggcccgcaacttcttcctgagccccgaaaaa
ctgtattcgcgcaagctcaccgagatcttcatcgcgctgcgcatcgagcatgagctgagc
aaggaccagatcctcgagctgtatctcaacaagatgttcctcggccaccgctcctacggc
gtggccgcggcggccgagtattactacggcaagacgctggaccagctgaccgtggccgaa
tgcgcactgatcgcctcgaccttccagctgccctcggcggtcaatccgatcaacagcccg
aagcgggcgatggcccggcgcaactgggtactgggcgaaatgctgcgccacgactacatc
acccgggccgtgtacgaacaggcgatcgccgagccgaaccatgcctacccgcacgagcag
ccgatcgaggtggatgccccttacctggccgagatggtgcgccggcaggtgctcgaccgc
ttcggcaacgatgcgctgaccgagggttacgtggtcaggaccacgctgcagagcagccgc
cagcaagccgccgtggaagcactgcgcgacgggctggtcgcctatgaccgccggcacggc
tggcgcggaccggaggcccaccaggacctgccggccggcgccggcgaggcggacctcgac
ggcctgctgtccgcctacgccagcgtctccggcatgcagccgggcgtcgtcaccgccagc
gacgcgaagcaggccacggtctacctgtccagccgcgagagcgtcatcctcgacctggcc
gccgtcagctgggcgcgtccgcacatcagcgacgaccgtgtcggcgcggcgccgacccgc
gtcgacggcgtgctcaagcgcggcgacatcatccggctggcgcgcgacgacaagggcgag
tggcagctggcgcagatccccgaggcgcaggccgcgctagcctcgatcgcgccggaggac
ggctcgatccaggcgctggtgggcggcttcaacttcgtgcgcagcaagttcaaccgggcc
gtgatggcggcgcgccagcccggctccagcttcaagccctacctgtactcggcagcgttc
gagcgcggcttcaccccggcctcgatcatcaacgatgcgccgctcgccctgcccgacccc
tcgcgcccgaacggcatctggacgccctccaacgacgacgacaagttcgccgggccgatg
cgcctgcgcgaagcgctggtgcagtcgaagaacctggtctcggtgcgcctgctcgatgcc
gtcggcgtgcgctacatgcgcgagtacgccacccgtttcggcttctcgcaggacgcgatg
ccggccaacctgtcgatggcgctgggcaccgcctcggtgtcaccgatgggcatggcgcgc
ggctacgcggtgttcgccaacggcggctacctggtcacgccgtacttcatccacgaaatc
gacgaccgcaccggccaggcggtctacgtggccaaccccgcgcgcgcctgccgcaactgc
caggagcgcctgctcgacacgcagccgcccgggccgccaccggccggaatgaatcccaca
ccggccaacaacctcgccagcacctcgtctgcggcacccgctgaatccagcagcatcgat
ggcgtcggcgacgcggtactgcctgccgacgcgcacggcgacggcgcgcacccgccggtg
ctcgcgccgcacgtgatcgaggcgcgcaacgactacctggtgacctcgctgatgaaggac
gtgatcctgcgtggcaccggctcggccgcacgcgcgctgggtcgcgacgatctggccggc
aagaccggctccaccaacgaccaccgcgacgcctggttcgtcggtttcgacggcgagctg
tcgaccgccgtgtgggtgggcttcgacaactacaactcgctcggccgcggcgagttcggc
gccagggccgcgctgccgatctggatgtcctacatgggcagtgtgctgaagggacagccg
tcgagcacgttgccgatgccgccgggaatcagtacggtatggatcaaccgcgacagcggc
ctgcccgcctcgtcggacgatccggacggcatcaacgagatgttcaaggtggaagacgtc
gaccggctgcgcagccaggccgcccagcagaaggaacaggaccagcagcacgcctacgac
atcttctga
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