Rhodanobacter denitrificans: R2APBS1_3503
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Entry
R2APBS1_3503 CDS
T02495
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R2APBS1_3503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhd03400
]
R2APBS1_3503
Enzymes [BR:
rhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R2APBS1_3503
DNA repair and recombination proteins [BR:
rhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R2APBS1_3503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
Zn_ribbon_FGT1_1
AAA_22
TrwB_AAD_bind
PIF1
Motif
Other DBs
NCBI-ProteinID:
AGG90566
UniProt:
I4WWB8
LinkDB
All DBs
Position
3713801..3715975
Genome browser
AA seq
724 aa
AA seq
DB search
MPAVLRVALPVPLPGLFDYLPPTVGAACVGSRVLVPFGRHKLVGMVVAIDAEAAVGSSRL
KQVLRLLDDGALLDPELMQTLAWAADYWLGAPGEAYANALPLALREAKPLPPIGDEYWSL
SGAGRSAHDAGSRRGGSKALLGLLAAGALSAQELSERQPGWRDAARRLAAAGLLERSERP
PPDRPLPPSLAPQLSDEQQQAVAAVDASLGRYQPFLLDGVTGSGKTEVYLALIEQVLAQG
RQALLLVPEIGLAPQTVRRLRERLGVIVEVLHSNLSEGDRARAWLRARAGSARVILGTRS
AVFTPLPQAGLIIVDEEHDSAYKQQEGFRYHARDLALVRARALGVPVLLGSGTPSLESLA
NAEAGRYRTLHLRARPGAIRPPQVQIIDMRAQRLEHGMSPALLGAVADTVARGEQALVFR
NRRGYAPVLLCHACGWHAGCPRCDRPLTLHAGRRQLICHHCDYRQRVPAACPTCGAGDLK
PQGQGTERLEEALLAQFPQVPVLRVDRETTRRRDAFEQLLATLKDDQPAILVGTQMLAKG
HDLPNLTLVAIVGVDEGLHSIDFRAGERLAQLVVQVAGRAGRARKPGRVVLQTHQPEHPL
LRSLLAHGYAAAARELLAERRLIQLPPYSYQVLLRAEAPQREQVDAFLAAAHAALPVNAQ
LQIAGPMSAPMPLRAGRHRGQLLLEAASRRTLHGRLRSWQLALIALPSARKVRWSLDVDP
IDLY
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgttcttcgcgtcgccctgccggtccctctgccaggcctgttcgactacctg
ccgccgacggtgggcgcggcctgcgtgggcagccgggtgctggtgccgttcggtcgccac
aagctggtcggcatggtggtggcgatcgacgccgaggcggcagtcggcagcagccggctg
aagcaggtactgcgcctgctcgacgacggcgcgctgctcgaccccgagctgatgcagacc
ctggcctgggccgccgactactggctgggtgcgccgggcgaggcctacgccaatgccttg
ccgctggccctgcgcgaggcgaagccgctgccgccgatcggcgacgaatactggtcgctc
agcggcgccggccgcagcgcgcacgatgccggtagccgccgcggcggcagcaaggccttg
ctgggtttgctggctgccggcgcattgagcgcgcaggagttgagcgagcgccagccgggc
tggcgcgacgccgcgcgccggctggccgcagccggcctgctcgaacgcagcgaacggccg
ccgcccgatcgtccgctgccgccctcgctggcgccgcaactcagcgacgaacagcagcag
gcagtcgccgccgtggacgccagcctcggccgctaccagccgttcctgctcgatggcgtc
accggcagcggcaagaccgaggtctacctggcactgatcgaacaggtgctggcgcaaggc
aggcaggcgctgctgctggtgccggagatcgggcttgccccgcagaccgtgcggcgcctg
cgcgagcggctcggagtgatcgtcgaggtgctgcactcgaacctgtccgaaggcgatcgc
gcgcgcgcctggctgcgcgcccgcgccggcagcgcgcgggtgatcctgggcacccgctcg
gcggtgttcacgccgctgccgcaagccggcctgatcatcgtcgacgaggaacacgacagc
gcctacaaacagcaggaaggcttccgctaccacgcccgcgacctggccctggtgcgcgcc
cgcgcgctcggcgtgccggtgctgctgggctcgggcacgccgtcgctggaatcgctggcg
aatgccgaggccggccgctaccgcaccctgcatctgcgcgcgcgccccggcgcgatccgg
ccaccgcaggtgcagatcatcgacatgcgcgcacagcggctggagcacggcatgtcgccg
gcgctgctcggcgcggtggccgatacggtggcacgcggcgaacaggcgctggtgttccgc
aaccgccgcggctacgcgccggtgctgctgtgccatgcctgcggctggcatgccggctgc
ccgcgctgcgaccggccgctgaccctgcacgcgggtcggcgccagctgatctgccatcac
tgcgactatcgccagcgcgttcccgccgcctgcccgacttgcggcgccggcgacctgaag
ccgcagggccagggcaccgagcggctggaggaagcgctgctcgcgcagttcccgcaggtg
ccggtgctgcgcgtcgatcgcgaaaccacccgccgccgcgacgcgttcgaacaactgctg
gccacgctcaaggacgaccagccggcgatcctggtcggcacgcagatgctggccaagggc
cacgacctgcccaacctcaccctggtcgccatcgtcggcgtggacgaaggcctgcacagc
atcgacttccgcgccggtgaacggctggcgcaactggtggtgcaggtggccggccgcgcc
ggccgcgcgcgcaagccaggccgcgtggtactgcagacgcaccagccggaacatccgctg
ctgcgcagcctgctggcgcacggttatgccgccgcagcgcgcgagctgctggccgagcgc
cgactgatccagctgccgccgtacagctaccaggtgctgctgcgtgccgaggcaccgcag
cgcgaacaggtcgatgcgttcctcgccgcggcacacgccgcgctgccggtcaacgcgcag
ttgcagatcgccgggccgatgtccgcgccgatgccgttgcgtgcgggccggcatcgcggc
cagctgctgctggaggcggccagccgtcgcaccctgcacggcaggctgcgctcgtggcag
ctggcgctgatcgcgctgccgtcggcacggaaggtacgctggtcgctggatgtcgatccg
atcgatctgtactga
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