KEGG   Rhodanobacter denitrificans: R2APBS1_3517
Entry
R2APBS1_3517      CDS       T02495                                 
Name
(GenBank) DNA helicase, Rad3
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
rhd  Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rhd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhd03400]
    R2APBS1_3517
Enzymes [BR:rhd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     R2APBS1_3517
DNA repair and recombination proteins [BR:rhd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    R2APBS1_3517
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 NBD_C AAA_25 PhoH
Other DBs
NCBI-ProteinID: AGG90580
UniProt: M4NI13
LinkDB
Position
3730038..3732155
AA seq 705 aa
MLADTTKDAIRAAYTRLKDGLPDFRARASQGRMIAEVAKALATEGGVAVIEAPTGTGKSM
AYLIAGVAVARFQKKKLLIATATVALQEQLVQRDIPLYLGLNGIEAKVALAKGRGRYLCP
RNLLMAANSIHDAQLGLAGFEADLMLWSKPPQPRDKQALAKLRDAFDRREWDGDMDSTPE
PVSELLRPMITTSAGGCTNRKCGQFMACPFFAARRAVDDAEIIVANQDLVLADLTMPGEG
DGGVDPAWGGVILPRPDDTLYVFDEAHHLPGKALDRGAAEVYMSASVRQLNRLGRQVHAA
YSLTDKETLGRLALDAGDAKLQELSDVLEELEKAIRLGWLPDPAETEPMYRGSLGQLPEP
WVEHARVLGLLTGEVQRWLGAVRRAVVEMTDGGPTQEALSRELGIALERIGRQAACWRAW
SADDPDDAPPLARWVTLGADQQLVCHASAVSAAGLLREVLWGNASGVLLTSATLSAGGNF
RGFADAVGLPDDAVTLSLPSPFDLAAQARLEVPTMRTLPDAREAHAEEISEWLADHLDWG
AGNLVLFTSRAKLDRVLQKLPIAQVRKVRAQGSLGKSQLVAEHCADVEAGKGSTLFGLAS
FGEGLDLPGKLCETVVITQLPFAVPTDPVGATYAEWLESRGRNPFIEVSVPEATRLLTQY
CGRLIRNESDCGRIVLLDRRVVTKRYGAGMLKALPPFRRVIERSA
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgctcgccgacaccaccaaggacgccatccgcgccgcctacacgcgcctgaaggacggc
ctgccggatttccgtgcgcgcgcctcgcagggacgcatgatcgccgaggtggccaaggcg
ctggccaccgagggcggcgtggcagtgatcgaggcgcccaccggcaccggcaagtcgatg
gcctacctgatcgccggggtggcggtggcgcgcttccagaagaagaagctgctgatcgcc
accgccaccgtggcgctgcaggaacagctggtgcagcgggatatcccgctctacctcggg
ctcaacggcatcgaggcgaaggtggcgctggccaagggccgcggccgctacctgtgcccg
cgcaacctgctgatggcggccaacagcatccacgacgcgcagctgggcctggccggtttc
gaggcggacctgatgctgtggagcaagccgccgcagccgcgcgacaagcaggcgctggcg
aagctgcgcgacgcgttcgaccgccgcgagtgggacggcgacatggacagcacgccggag
ccagtcagcgagctgctgcggccgatgatcaccaccagcgccggcggctgcaccaaccgc
aagtgcggccagttcatggcctgcccgttcttcgccgcgcgccgcgcggtggacgatgcc
gagatcatcgtggcgaaccaggacctggtgctggccgacctcaccatgccgggcgagggc
gatggcggtgtcgacccggcctggggcggggtgatcctgccgcgcccggacgatacgctg
tacgtgttcgacgaagcccaccacttgcccggcaaggcgctcgatcgcggcgcggctgag
gtctacatgagcgccagcgtgcgccagctgaaccggctcggccgccaggtgcacgcggcc
tactcgctgaccgacaaggagaccctgggccggctcgcgctggacgccggcgacgcgaag
ctgcaggagctcagcgacgtgctggaggaactggaaaaggccatccgcctgggctggctg
cccgacccggccgagaccgaaccgatgtaccgcggttcgctgggccagctgcccgagccg
tgggtggagcatgcgcgggtgctcggcctgctcaccggcgaggtgcagcgctggctgggc
gcggtgcgccgcgcggtggtggagatgaccgacggcgggccgactcaggaggcgctgtcg
cgcgagctgggcatcgcgctggaacgcatcggccggcaggcggcctgctggcgcgcctgg
tcagccgacgatccggatgacgcgccgccgttggcgcgctgggtcaccctgggcgccgac
cagcaactggtctgccacgcctcggcggtgtccgccgccggcctgctgcgcgaggtgctg
tggggcaacgccagcggcgtgctgctgacctcggccacgctgagcgccggcggcaatttc
cgcggcttcgccgatgcggtgggcctgcccgacgacgcggtgacgctgagcctgccctcg
ccgttcgacctcgccgcgcaggcgcggctggaagtgcccacgatgcgcacgctgcccgac
gcgcgcgaggcgcacgccgaggagatcagcgagtggctggccgaccacctcgactggggc
gccggcaacctggtgctgttcacctcgcgcgccaagctcgaccgcgtgctgcagaaactg
ccgatcgcgcaggtgcgcaaggtgcgcgcgcaaggttcgctgggcaagtcgcagctggtg
gccgagcattgcgccgacgtcgaggcgggcaagggcagcacgctgttcgggctggcctcg
ttcggcgaaggcctggacctgcccggcaagctgtgcgagacggtggtgatcacccagctg
ccgttcgcggtgccgaccgacccggtcggcgccacctacgccgagtggctggaatcgcgc
gggcgcaacccgttcatcgaggtcagcgttcccgaggccacgcgcctgctcacccagtac
tgcggccgcctgatccgcaacgaaagcgactgcggccgcatcgtgctgctggaccgccgc
gtggtcaccaagcgctatggcgccggcatgctgaaggcgctgccgccgttccggcgcgtc
atcgagagaagcgcatga

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