Rhodanobacter denitrificans: R2APBS1_3530
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Entry
R2APBS1_3530 CDS
T02495
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R2APBS1_3530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhd03400
]
R2APBS1_3530
Enzymes [BR:
rhd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
R2APBS1_3530
DNA repair and recombination proteins [BR:
rhd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R2APBS1_3530
Prokaryotic type
R2APBS1_3530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGG90593
UniProt:
M4NLQ7
LinkDB
All DBs
Position
complement(3747332..3748054)
Genome browser
AA seq
240 aa
AA seq
DB search
MSDAAQIRLEPSWKARIGDYLVRPEMQALAAFLRAEKQAGKRIYPPGPEIFAAFAHTPFD
AVRVVILGQDPYHGPGQAHGLCFSVRPGVRVPPSLENIFKEIQRDLDIARPDHGCLTPWA
DRGVLLLNSVLTVEEGRAGSHQGKGWEGFTDAAIDALGREHEGLVFLLWGSYAQRKGQLI
DTRKHCVLKSVHPSPLSAHRGFLGCGHFSAANRYLEAHGQAPIDWSLPPRAALGDGFTPA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcggcgcagatccggctggaaccgtcgtggaaggcgcgcatcggcgactac
ctcgtgcgcccggagatgcaggcgctggcggcgttcctgcgcgcggagaagcaggccggc
aagcggatctatccgcccggtccggagatcttcgccgcgttcgcgcacaccccgttcgac
gcggtgcgggtggtgatcctgggccaggatccgtaccacggccccggccaggcgcacggc
ctgtgcttctcggtgcgccccggcgtgcgggtgccgccgtcgctggaaaacatcttcaag
gaaatccagcgcgacctcgacattgcgcgccccgaccacggctgcctcacgccgtgggcc
gaccgcggcgtgctcttgctcaacagcgtgctgacggtggaggaaggccgcgccggctcg
caccagggcaagggctgggaaggcttcaccgacgcggcgatcgacgcgctgggccgcgag
cacgaaggcctcgtgttcctgctgtggggcagctacgcccagcgcaaggggcaactgatc
gacactcgcaagcactgtgtgctgaagagcgtgcacccctcgccactgtcggcgcaccgc
ggcttcctcggctgcggacatttttccgcggcgaaccgctatctggaagcgcacggccag
gcgccgatcgactggtcgctgccgcctcgcgccgcgctgggggacggtttcacgcccgct
tga
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