Rhodanobacter denitrificans: R2APBS1_3600
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Entry
R2APBS1_3600 CDS
T02495
Name
(GenBank) malate synthase
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00620
Pyruvate metabolism
rhd00630
Glyoxylate and dicarboxylate metabolism
rhd01100
Metabolic pathways
rhd01110
Biosynthesis of secondary metabolites
rhd01120
Microbial metabolism in diverse environments
rhd01200
Carbon metabolism
Module
rhd_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
R2APBS1_3600
00630 Glyoxylate and dicarboxylate metabolism
R2APBS1_3600
Enzymes [BR:
rhd01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
R2APBS1_3600
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Gene cluster
GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
DUF6986
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
AGG90663
UniProt:
M4NLW9
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All DBs
Position
3823820..3825448
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AA seq
542 aa
AA seq
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MAVPQERLDTGSVEIHADPAGYAGILTPAALAFLARLHRRFEATRRLLLQARRERQARYD
AGDLPDFRADTAAIRDGDWRVAPIPAALQDRRVEITGPVERKMIINALNSGAKVFMADFE
DSSSPTFTNQLDGQLNLRDAVNGTIAFTSPEGREYRVNDKPAVLVVRPRGWHLHDRFFSV
DGEAVAGALVDFGLFAFHNARALHARDRGPYFYLPKLEAMEEAALWDAVMAAAEDELQLP
PGTMKATVLIETLPAAFQMHEILHALRRRAVGLNCGRWDYIFSYLKTLRGHRDRLLPERG
QVQMTAPFLKAYSELLIQTCHRRGAFAMGGMAAQIPIKGDEAANEAALAKVRADKLREVQ
AGHDGTWVAHPALVPVAQEIFDRYMPAPNQLGVLRQDVQVTREQLLAAPNGTITRAGFDN
NVEVCLRYTAAWLDGLGCVPIHHLMEDAATAEIARAQLWQWLRHADVPAGGAPAGGALEF
PDHAPIDFALFDHAVAVHTHRLRDSHHPGAARADDAAALLSAMTHADQLGDFLTLPAYDQ
LA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcccgcaggaacgactcgataccggcagcgtcgagatccacgccgacccggcc
ggctacgccggcatcctgactcccgcggcgctggccttcctggcccggctgcaccgccgc
ttcgaggccacccggcggctgctgctgcaggcccgccgcgagcgtcaggcccgttacgac
gccggcgacctgccggacttccgcgccgacaccgcggcgatccgcgacggcgactggcgc
gtggcgccgatcccggccgcgctgcaggaccgccgcgtcgagatcaccggcccggtcgaa
cgcaagatgatcatcaacgcgttgaactccggcgcgaaggtgttcatggccgacttcgag
gattcctcctcgcccaccttcaccaaccagctcgatggccagctcaacctgcgcgacgcg
gtgaacggcaccatcgcgttcacctcgcccgagggccgggaataccgcgtcaacgacaag
ccggcggtgctggtggtgcgtccgcgcggctggcacctgcacgacaggttcttcagcgtg
gacggcgaagcggtggccggcgcgctggtcgacttcggcctgttcgccttccacaacgcc
cgtgccctgcatgcacgcgaccgcggcccgtacttctacctgccgaagctcgaggcgatg
gaagaggccgcactgtgggacgcggtgatggcggcggccgaggacgagctgcagctgccg
cccggcacgatgaaggccaccgtgctgatcgagacgctgccggcggcgttccagatgcac
gagatcctgcacgcgctgcgccgccgcgcggtcggcctcaactgcggccgctgggactac
atcttctcgtacctgaagaccctgcgcggccatcgcgatcgcctgctgccggagcgcggc
caggtacagatgaccgcgccgttcctgaaggcctattccgagttgctgatccagacctgc
catcgtcgcggcgcgttcgcgatgggcggcatggccgcgcagatcccgatcaagggcgac
gaggcggcgaacgaggccgcgctggccaaggtgcgcgccgacaagttgcgcgaggtgcag
gccggccacgacggcacctgggtggcgcatccggcgctggtgccggtggcgcaggaaatc
ttcgaccggtacatgcccgcgccgaaccagctcggcgtgctgcgtcaggacgtgcaggtg
acgcgcgaacagctgctcgccgcgccgaacggcacgatcacccgcgccggcttcgacaac
aacgtcgaggtctgcctgcgctacaccgcggcctggctggacggcctgggctgcgtgccg
atccaccacctgatggaggacgccgccaccgccgagatcgcgcgcgcgcagctgtggcag
tggctccgccacgccgatgttccggccggcggggcgccggccgggggcgccctggaattc
cccgaccacgcgccgatcgacttcgcgctgttcgaccacgccgtagccgtgcacacccac
cgcctgcgcgacagccaccaccccggcgccgcccgcgccgacgatgccgcggccttgctc
agcgcgatgacccacgccgaccagctcggcgacttcctcaccctgcccgcctacgaccag
ctcgcctga
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