Rhodanobacter denitrificans: R2APBS1_3935
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Entry
R2APBS1_3935 CDS
T02495
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R2APBS1_3935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhd03400
]
R2APBS1_3935
Enzymes [BR:
rhd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
R2APBS1_3935
DNA repair and recombination proteins [BR:
rhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
R2APBS1_3935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AGG90985
UniProt:
I4WNB1
LinkDB
All DBs
Position
complement(4199626..4200438)
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AA seq
270 aa
AA seq
DB search
MKIASWNVNSLKVRLPQLTQWLADTRPDVVALQETKLEDAKFPVDELAAAGYRAVYSGQK
TYNGVAILARDGVHDDFGEVVTDIPGLHDPQRRILAASVGDPASGPRQTLRVVNLYVVNG
KAVGDEKYAYKLDWLAKVREFLAHELERHPNLVVLGDFNICPDDRDVYDPVAWGADILCS
PPERAALKAITDLGLHDSFRLFQAEPGHYSWWDYRQAAFRRNMGLRIDLILIGDALKSAA
TAAAIDREPRRWERPSDHTPVTLDLDLRTT
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcctcgtggaacgtcaactcgctgaaggtgcgcctgccgcagctgacccag
tggctggccgacacgcggccggacgtggtggcgctgcaggaaaccaagctggaggacgcg
aagtttccggtggacgagctggcggcggcgggctatcgggcggtgtattcgggccagaag
acctacaacggggtggcgatcctggcccgcgacggcgtccatgacgactttggcgaggtg
gtcaccgacattcccggcctgcatgatccgcagcgacggatcctcgccgccagcgtcggc
gaccccgcctcgggtccgcggcagacgctgcgcgtggtgaatctctatgtagtcaacggc
aaggcggtcggcgacgagaagtacgcgtacaagctggactggctggccaaggtgcgcgag
ttcctggcgcatgagctggaacgccacccgaacctggtcgtgctgggagacttcaacatc
tgcccggacgaccgcgacgtctacgacccggtggcctggggcgcggacatcctgtgctcg
ccgccggagcgcgccgcgctgaaggcgatcaccgacctcggcctgcacgacagcttccgg
ctgttccaggcggagcccgggcactacagctggtgggattaccggcaggccgcgttccgc
cgcaacatgggtctgcgcatcgatctgatcctgatcggcgatgccctgaaatccgccgcc
accgcggcggcgatcgaccgtgagccgcgccgctgggagcgaccttcggaccacacgccg
gtgacgctggacctggatctccgaacgacatga
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