Rhodococcus sp. DK176: PSR88_23395
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Entry
PSR88_23395 CDS
T11877
Name
(GenBank) ATP-binding protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rhde
Rhodococcus sp. DK176
Pathway
rhde04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rhde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PSR88_23395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhde03019
]
PSR88_23395
03009 Ribosome biogenesis [BR:
rhde03009
]
PSR88_23395
04131 Membrane trafficking [BR:
rhde04131
]
PSR88_23395
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhde04147
]
PSR88_23395
Messenger RNA biogenesis [BR:
rhde03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PSR88_23395
Ribosome biogenesis [BR:
rhde03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
PSR88_23395
Membrane trafficking [BR:
rhde04131
]
SNARE
SNARE associated proteins
Others
PSR88_23395
Autophagy
Aggrephagy
Other aggrephagy associated proteins
PSR88_23395
Exosome [BR:
rhde04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PSR88_23395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
Acetyltransf_7
AAA_28
AAA_16
AAA_14
Acetyltransf_10
AAA_5
AAA_22
Acetyltransf_6
RuvB_N
AAA_33
AAA_18
Rv0428c_N
SKI
TIP49
AAA_17
AAA_lid_3
RNA_helicase
ATPase_2
nSTAND3
TsaE
nSTAND_NTPase5
NACHT
AAA_24
AAA_30
AAA_11
AAA_19
IPT
AAA_2
ABC_tran
IstB_IS21
Cytidylate_kin
Mg_chelatase
FR47
bpMoxR
Parvo_NS1
KTI12
Motif
Other DBs
NCBI-ProteinID:
WZV28454
LinkDB
All DBs
Position
complement(4953981..4955243)
Genome browser
AA seq
420 aa
AA seq
DB search
MDAWSIRDFEPEDLESVVRMDSSSTTTDQPPLFALSDVVGSLLNRHPAVVATKDGLIIGT
AVARVDEDRAWVMRLSLDPEWRAQGLGSALLSQLEHQLLARGVRRVSALLPEGETGATAL
SNSGFTARSGVTYYEKLGTVSPRTAGVLATLGGAVPPAGLWKQVAGMSREKSLIERKIVL
PLSRPALAADHGVAPPRAVVLFGPPGTGKTTFARAIASRLGWPFVELFPSRLAAGENGLA
AGLGEAFTSMGELEHVVVFIDEVEEVAARRRPGSQSVGVVNELLKSIVHFRERGGRLLVC
ATNSVRALDDAFLRHGRFDYVLPIGAPDAEARHALWERYLGNEQVDVSALVAATEGYTPA
DVAHAARTVAQATFECSVDSGGRCHAGTQDYLDVIGTVRPTLTAEMMQAFTEDIAGHART
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctggagcatccgagacttcgaaccggaggatctcgagtccgtcgtgcgcatg
gacagcagttccaccaccacagaccaaccgcccctgttcgcgctgtcggacgtggtcgga
agtctgctgaaccgtcacccggcggtcgtcgcgacgaaggacggtctcatcatcgggacg
gcggtcgctcgcgtcgatgaggaccgcgcctgggtcatgcgcctctccctcgatcccgaa
tggcgtgcccaagggctcggcagcgccctgctgtcgcagctcgagcaccagctcctcgcc
agaggagtgcggcgggtgagcgcgctcctccccgaaggtgagaccggtgccaccgcgctg
agcaattccggattcaccgcccgcagcggagtcacgtactacgagaagctcgggacggtg
tcgccccgtacggccggggtcctggcgacgctcggcggcgcggtaccgcccgccggactg
tggaaacaggtcgccggcatgtcccgggagaagtcgctgatcgaacgcaagatcgtgctc
cccctgtcgcggcccgcgctggccgccgaccacggcgtggcaccgccgcgcgccgtggtc
ctgttcggaccaccgggaaccgggaagacgacgttcgcgcgtgccatcgccagccggctc
ggctggccgttcgtcgaactgttcccgtcgcggctcgcggccggcgagaacggtctcgct
gccggtctcggagaggcgttcacgtcgatgggcgaactcgagcacgtcgtcgtcttcatc
gacgaggtggaggaggtggcggcgcggcgcaggcccggatcgcagtcagtcggggtggtg
aacgaactgctgaaatcgatcgtccacttccgtgaacgcggcggacggttgctggtgtgc
gccaccaattccgttcgcgcactggatgatgcgttcctacgtcacggacgtttcgactat
gtgctgccgatcggcgcgccggacgcggaggcccggcacgcactgtgggagcggtacctc
ggcaacgagcaggtcgacgtgtccgccctcgtcgccgcgaccgagggttacacgcccgcc
gacgtcgcgcacgcggcacggaccgttgcgcaggcgacgttcgagtgcagcgtcgactcg
gggggacgctgccatgccggtacccaggactacctggacgtgatcggcacggtgcgtccc
accctcaccgccgagatgatgcaggcgttcacggaggacatcgccggtcacgcccgcacc
tga
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