Rhodococcus sp. DK176: PSR88_29180
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Entry
PSR88_29180 CDS
T11877
Name
(GenBank) putative bifunctional diguanylate cyclase/phosphodiesterase
Organism
rhde Rhodococcus sp. DK176
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GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
GGDEF_GdpP
GAF_3
Motif
Other DBs
NCBI-ProteinID:
WZV29546
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Position
6286296..6288140
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AA seq
614 aa
AA seq
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MNTEKQTEKLETLVTTVASRLTPVDAVSFKPVATRVLQDLVEHFEVDTSFLRFTDHEIAA
TVLVAEYPLRPFIPDPDPLGIVYFKDADSTFAQIEHQKEVAIFRPEVSGPDYNERVREAS
GVPQVSLAAVPLLSGDTTTGTLGFIKFGDRDWTPPELDVLKAIAALLAQVQARIVVEEQL
RYSADHDSLTGLSNRRALYHHLDTRLAESEAGPVAILFLDLDRLKPLNDFFGHGAGDGFI
STIADRLRSTSQTDDLVSRLGGDEFVLVLGGSVGLEEAEVRAQHIRDVVTERVRLGREVV
SRSVSIGVAVGIPGKATTSSLLSQADQAVMVAKTKGGNAISVFTDEMQEESEKRNMIELS
LRAAIADESLFLEYQPEVDLRTGRIIGVEALVRWNHPLLGLLQPASFIDVAEATNVAGEL
GRWVIRKACRQWADWRSQVPELDLDLRVNVSPGQLAGLDFLDVVANALTEFDLRKGALCL
EITENAVLSDLTWTREALEGLHAMDVEVAIDDFGTGFSSLSHLKALPVGTLKIDKGFVMN
LDTNPEDRAIVKSIIGLAESFGLELVAEGVENVESARQLLDMGCHRAQGFLFSRPVSAEK
IGKLLAAGAIEVGL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaccgagaagcaaaccgaaaagctcgagaccctggtgacgaccgtggcgtcccgg
ctcacgcctgtcgatgcggtctcgttcaagcccgtggccacccgcgtgttgcaggatctc
gtggagcacttcgaggtcgacaccagcttcctccggttcacagaccacgagatcgcggcg
acggtcctggtcgcggaatacccgctccggcccttcatcccagaccccgacccgctcggc
atcgtctacttcaaggacgccgactcgacgttcgcccagatcgagcaccagaaggaagtg
gccatcttccggccggaggtgtccggtccggattacaacgagcgggttcgcgaggcgtcc
ggggtgccgcaggtgtcgctcgcagccgttccgctgctgtccggtgacacgacgacgggc
acgctcggattcatcaagttcggcgaccgcgactggacgccgccggagctcgacgtcctc
aaggcgatcgccgccctgctcgcccaggttcaggcgcgcatcgtcgtcgaggagcagttg
cgctactcggccgaccacgattccctcaccggtctcagcaaccggcgcgcgctctaccac
cacctggacactcgtctcgccgagtccgaagccgggccggtcgcgatcctgttcctcgac
ctggaccggttgaagcctctcaacgacttcttcggtcacggagccggtgacggattcatc
tcgacgatcgcggaccggctcagatcgaccagccagaccgacgacctcgtttcccggctg
ggcggcgacgaattcgtgctcgtgctcggcggatcggtggggctggaggaggcggaggtg
cgggcgcagcacatccgcgacgtcgtgaccgagcgggtgcgtctcggccgcgaggtggtc
agccgcagcgtcagtatcggcgtcgcggtcggaattccgggcaaggccaccaccagttcg
ctcctcagccaggccgaccaggccgtcatggtcgcgaagaccaagggtgggaacgcgatc
agcgtcttcaccgacgagatgcaggaggagagcgagaaacgcaacatgatcgagctcagt
ctgcgtgcggccatcgcggacgagtcgctgttcctcgagtaccagcccgaggtcgatttg
cggaccggccggatcatcggggtggaggccctggtgcggtggaatcacccgctgctcggg
ttgctgcagccggcgtcgttcatcgacgtcgccgaggcgacgaatgttgcgggggagctc
gggcgctgggtgatccggaaggcctgccggcagtgggccgactggcggtcgcaggtgccc
gagctggatctggatcttcgcgtcaacgtctcgccggggcagttggccggtctggatttt
ctcgacgtcgtcgcgaacgcgttgacggaattcgaccttcggaagggcgcgctgtgcctg
gagatcaccgagaacgcagtgctcagtgatctgacctggacgcgtgaagcgctcgaaggt
ttgcacgcgatggacgtggaggtcgcgatcgacgacttcggcaccgggttcagctccctc
agccacctcaaggcgctgccggtggggacgctgaagatcgacaaaggtttcgtgatgaac
ctggataccaaccccgaggatcgggcgatcgtgaagtccatcatcggtctcgccgaatcg
ttcggcctggagctggtcgcggagggcgtcgagaacgtcgagtcggcccggcaactcctc
gacatgggatgccatcgggcgcagggcttcctgttcagccggccggtctcggcggagaag
atcggtaagttgctggcggccggagccatcgaggtcgggctgtag
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