Rhodococcus sp. DK17: PST05_15170
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Entry
PST05_15170 CDS
T11476
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhdk Rhodococcus sp. DK17
Pathway
rhdk00260
Glycine, serine and threonine metabolism
rhdk00460
Cyanoamino acid metabolism
rhdk00630
Glyoxylate and dicarboxylate metabolism
rhdk00670
One carbon pool by folate
rhdk00680
Methane metabolism
rhdk01100
Metabolic pathways
rhdk01110
Biosynthesis of secondary metabolites
rhdk01120
Microbial metabolism in diverse environments
rhdk01200
Carbon metabolism
rhdk01230
Biosynthesis of amino acids
rhdk01240
Biosynthesis of cofactors
rhdk04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rhdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PST05_15170 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PST05_15170 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PST05_15170 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PST05_15170 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PST05_15170 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PST05_15170 (glyA)
Enzymes [BR:
rhdk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PST05_15170 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
DUF8101
Motif
Other DBs
NCBI-ProteinID:
WZV34789
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Position
3213683..3214951
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AA seq
422 aa
AA seq
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MSVLNRDLADFDPDVAALIGKELERQRTGLEMIASENHAPLSVMQAQGSVLTNKYAEGYP
GRRYYGGCEHVDTIEQLAIDRVKALFAAEYANVQPHSGATANASVMHALIEPGDTILGLS
LADGGHLTHGMRLNFSGKLYNVAAYGVSEQDYLIDMDEVAKAAREHRPQLIIAGWSAYPR
HLDFARFREIADEVGAYLMVDMAHFAGLVATGFHPSPVPHAHVVTSTTHKTLGGPRGGII
LTGDAAIAKKINSAVFPGQQGGPLEHVIAGKATAFKMAAEPEFAERQERCLDGAKVLAER
LSRPDVKEAGISVLTGGTDVHLVLVDLRDAAIDGQQAEDRLDAIGITVNRNAVPFDPRPP
MVTSGLRIGTPALAARGFGRDDFATVADLIAQALVAPADADTSGLAAQVRVLADKYPLYP
GL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcctgaaccgcgacctcgcggatttcgacccggacgtcgccgcactgatcggc
aaggagctggagcgccagcgcaccggcctcgagatgatcgcgtcggagaaccacgccccg
ctttcggtgatgcaggcgcagggttccgtgctgaccaacaaatacgccgagggctacccc
gggcggcgctactacggcggctgcgagcacgtcgacacgatcgagcagctcgccatcgat
cgcgtcaaggcgctgttcgccgccgaatacgccaacgtgcaaccgcattccggcgccacc
gcgaacgcgtcggtgatgcacgcgctgatcgagccgggcgacacgatcctcggactgtcc
ctcgccgacggcggccacctcacgcacggcatgcgcctcaacttctccggcaagctctac
aacgtcgccgcctacggggtgtccgaacaggactacctcatcgacatggacgaggtggcg
aaggcagcacgcgagcaccggccgcagctgatcatcgccggctggtcggcctacccccgg
cacctggacttcgcccgcttccgggaaatcgccgacgaggtcggcgcgtacctgatggtc
gacatggcccacttcgcgggtctggtcgccaccggattccacccgtctcccgtcccgcac
gcacacgtcgtcacgtcgacgacgcacaagaccctcggcggaccccgcggcggcatcatc
ctgacgggcgacgccgccatcgcgaagaagatcaactccgcggtgttccccggccagcag
ggcggcccactggaacacgtgatcgcgggcaaggcaacggcattcaagatggcggccgaa
cccgaattcgcggagcgtcaggaacgctgcctggacggcgcgaaggtgctcgccgaacgg
ctcagccgacccgacgtcaaggaagccggaatcagcgtcctcaccggcggcacggacgtg
cacctcgtcctcgtcgacctgcgggatgccgccatcgacgggcagcaggccgaggaccgc
ctcgatgcgatcggaatcaccgtcaaccgcaacgccgttccgttcgatccacggccgccg
atggtgacgtccggtctgcgtatcggcaccccggcactcgccgcccgcggcttcggccgg
gacgacttcgcgaccgtcgccgacctgatcgcccaggccctcgtcgcgcccgccgacgcg
gacacgtccgggttggccgcccaggtccgggtgctcgcggacaagtaccccctctacccg
ggcttgtaa
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