Rhodococcus sp. DK17: PST05_16990
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Entry
PST05_16990 CDS
T11476
Name
(GenBank) RNA-guided endonuclease InsQ/TnpB family protein
KO
K07496
putative transposase
Organism
rhdk Rhodococcus sp. DK17
Brite
KEGG Orthology (KO) [BR:
rhdk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PST05_16990
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
WZV35117
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Position
complement(3612041..3613183)
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AA seq
380 aa
AA seq
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MAGRVVKRAFKFRFYPSAVQAEQLARTFGCTRYVYNRALAERSRAWSQERRRVTYADTSK
MLTGWKRDAEAEWLAEPSKGPLQESLRQLQGAFERFWRKQTGYPQFKRKGRSKDSATYYS
NCFIFRDGQLRLAKQSEPLDIRWSRPLPEGATPSQVTVSRNARGQYHVSILVEDTITELE
PVDRVVGLDAGITSLYTLSTGEKITNPRHERTDRERLAKAQRALARKQKGSRNRAKARLK
VAKIHGRIADRRRDYLHKLSTRLVRENQVIAIEDLSVRNMVKNRSLSRVISDAGWSEFRS
MLEYKADWCGRRVVVIDRFCPSSKTCSVCGEVASAMPLNVREWTCRCGVVHDRDVNAARN
ILAVGLTVAACGDGVRPPRT
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcggggagggtggtgaagcgggcgttcaagtttcgcttctatccgtctgcggtgcag
gcggaacagcttgctcggacgttcgggtgcacccggtatgtctacaaccgggcgttggcg
gagcggtcgcgtgcctggtcgcaggagcggcggcgggtgacctatgcggatacctcgaag
atgctcaccggatggaagcgggatgccgaggcggagtggttggcggagccgtcgaagggg
ccgttgcaggaatcgctgcggcagttgcagggcgcgttcgagaggttctggcgcaagcag
accggctacccgcagttcaagaggaaggggcggtcgaaggattcggcgacctactactcg
aactgcttcattttcagggatgggcagctccggttggccaagcagtccgaacccctggat
attcggtggtcgaggccgctgccggagggggctacgccgtcgcaggtgacggtgtcgcgt
aacgctcgtggccagtaccatgtttcgatcctcgtcgaggacacgatcaccgaactcgag
ccggtcgatcgggtggtcgggctcgatgccgggatcacgagcctctacacgctctcgacg
ggggagaagatcaccaacccgcgccacgagcgcacggatcgtgagcggttggcgaaggcg
caacgagcactcgccaggaagcagaagggatcccggaaccgggccaaggcccgactgaag
gtcgcgaagattcatggtcggatcgccgatcggcgtcgcgattatctgcacaagctctcc
actcgactggtgcgcgaaaatcaagtgatcgccatcgaggatctgagtgtgcggaacatg
gtcaagaatcggtcgttgtctcgggtgatctcggatgcggggtggtccgagttccggtcg
atgctcgagtacaaggccgactggtgcgggcggcgggtggtggtgatcgatcggttctgt
ccgtcgtcgaagacctgctcggtgtgtggggaggtcgcctcggcgatgccgctgaacgtg
cgggagtggacgtgccgatgcggcgtcgtccacgaccgcgacgtgaacgcggcaaggaac
attttggccgtcggactgacggtggcagcctgcggagacggtgtgagaccgccccgcaca
taa
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