Rhodococcus sp. DK17: PST05_20765
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Entry
PST05_20765 CDS
T11476
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
Organism
rhdk Rhodococcus sp. DK17
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
Motif
Other DBs
NCBI-ProteinID:
WZV38951
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Position
4383208..4388265
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AA seq
1685 aa
AA seq
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MAEKDDDRVGASEATGNVTGSTGDMTVAQLREWLRNWIADATGQPVGQITDDRPMEEFGL
SSRDAVALSGEIEELVGVTLTATVAYQHPTIASLATRIIEGEPEQLDDSADAAYYASAPT
SDAHDIAIVGLASRFPGAGKTPAEMWQMLAEGRDGISDLPEGRWEEFTSDPQIKAAVEKA
NTQGGYLDDVKTFDAEFFAMSPLEVANVDPQQRLAMELTWEALEHARIPASDLKGEQVGV
FIGSSANDYQLLAVSDPVHAHPYALTGTSTSIVANRVSYFYDFRGPSIALDTACSSSLVA
VHQAVRSLRSGESDLALAGGVNMLVAPPATLGFDQLGVMAPNGRIKAFSSDADGMIRAEG
GGLVVLKRLEDAERDGDEILAVIAGSAVNQDGRSNGLAAPNPDAQADVLRHAYRDAGINP
AGVDYIEAHGTGTILGDPIEADALGRVVGRGRADDKPALLGSAKTNFGHLEAAAGAAGLI
KVVLSMQEDTLPPTLNFAGPNPYIAFDKAHLQVIPEGAAWPRYTGTAVAGVSGFGFGGTN
AHVVVREYTGPAADDAAEITEPAVPAEESVAEAVEQTVVLAVSGALPSRRRRAAADLADW
LETEEGSTTPLADVARSLARRNHGRSRAVVLAKTRSEAVTGLRAIAAGKPGQGVFSADSP
SSKGAVWVLSGFGSQHRKMAKQLYLENPVFAAAIDEVDALIEDEAGYSMKEKFLDDAIDY
DVETSQVGIFTIQIGLAALLRHHGAQPEAVVGHSMGEAAAAYISGGLPLEDAVRVICARS
RLMGEAEATLEGDDIRLMALVEYSASEIETVLTDFPHLEVCVYAAPTHTVIGGPEPEVNA
IVARAEGEEKMARVLKTKGASHTSQVDPLLGELAAELAGIEPTKLKLGVYSSVDQDTYYR
AGHEPIHREEYWTKGLRHSVYFTNAVRLAVGSGHTTFVELAPNPVALMSVAATVFDAGLH
DMQLIQTLKRKEDEPLGVLAALAQLYVHGHAVDLSSLLPEGDFASVPRTAWIRKPYWVET
RIDSSGNTRVPGAHVSLPDGRHVWEVQAGAVTDLPALVTAAASQVLSDVTLAASVLHAHA
PAEGTLTTTLNPHPGGASLQVHAKSGPSFTLLFDAAVTSGAALPEPVVAPPVQSTSPVEE
LPEVVEDIGEKWDPNGSQTLEDRLALIVAESMGYAPEDLPAEIPLIELGLDSLMAVRIKN
RVEYEFDIPQLQLQAVRDANLMEVGKYLRYAVENREEVQALADKQKAEKEAEEAAEAAGA
AEADRDAEAARDSEVAASPLDAEDTSVEAEAEAILAATPVPETAAAPEAAAVDSQEAFAD
ATGSDVPPRDAAERLTFATWAVVTGESAKGIFNTLPILNDETAEKLAARLSERANGEITF
DDVLDSTTIEELANVVRGFLEDSGKIDGLVRALRPRPEGSDAVPVFVFHPAGGSTVAYEP
LLKRLPEGTPMYGFERTEGPIEVRAAEYLPLIREIQGDGPYVLYGWSLGGVLAYAVAKLL
RESGADVRIVGLIDTVMAGEKVEDTPDEIRKRWQRYAAFAKKTYNVDYPLPYDKLAAAES
DEEQIKILTELLKLSGTKIPGGIIEHQRTSWLDNRAIQTAELEQYDGDVVLYMADRYHDD
VMNLEPAFKTRKPDGGWGDAVKNLEIIHVGGDHIQIVDEPYIAKVGADLTKKLAAIQAAG
TGAHQ
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaagatgatgaccgggtcggggcgagcgaagcgacggggaatgtcaccggc
agcacaggtgacatgacggtcgcgcagctacgcgagtggctgcgtaactggattgccgac
gcaacagggcaaccggtcggtcagatcaccgacgaccgcccgatggaagagttcggtctg
tcgtctcgcgacgcagtcgcgctcagtggcgagatcgaggaactggtcggcgtcacgctc
accgcgaccgtcgcctaccagcaccccaccatcgcgtcgctggccacccgcatcatcgag
ggcgaacccgagcagctcgacgactcggccgacgccgcgtactacgcgtcggcgccgacg
tcggatgcgcacgacatcgcgatcgtgggcctggcttcccgtttccccggtgcgggtaag
actcctgccgagatgtggcagatgctcgcggagggccgcgacggcatctccgacctgccc
gagggtcgctgggaggagttcacctccgacccgcagatcaaggcggccgtcgagaaggcc
aacacgcagggcggctacctcgacgacgtgaagaccttcgatgcggagttcttcgcgatg
tctccgctggaggtcgcgaacgtcgacccgcagcaacgcctcgcgatggaactgacgtgg
gaggcactcgagcacgctcgcatcccggccagcgacctcaagggtgagcaggtcggtgtg
ttcatcggcagctcggccaacgactaccagttgctcgcggtcagcgaccccgtccacgcg
cacccgtatgcgctgaccggtacgtcgacgtccatcgtcgccaaccgggtttcgtacttc
tacgacttccgcgggccgtcgatcgccctcgacacggcgtgctcgtcgtcgctcgtcgcg
gtgcaccaggcggtccgctcgctgcggtccggtgagtcggatctcgcgctcgccggcggc
gtcaacatgctcgtggcgccccccgccacgctgggcttcgaccagctgggtgtgatggcc
cccaacggccgcatcaaggcgttctcctccgacgccgacggcatgatccgcgccgagggc
ggcggtctcgtggtcctcaagcgtctcgaggacgccgagcgtgacggggacgagatcctc
gccgtcatcgccggcagcgccgtcaaccaggacggccgctccaacggtctcgcggccccg
aacccggatgcgcaggccgacgtcctgcgccacgcctaccgggacgcgggcatcaacccc
gccggcgtcgactacatcgaggcgcacggcaccggcaccatcctcggcgaccccatcgag
gccgacgcgctcggacgcgtcgtcgggcgtggacgcgccgacgacaagcccgcgttgctc
ggctcggccaagaccaacttcggtcacctcgaagccgccgcgggcgccgcgggcctgatc
aaggtcgtgctgtcgatgcaggaagacaccctgccgccgacgctgaacttcgccggaccc
aacccgtacatcgcgttcgacaaggcgcacctgcaggtcattcccgagggtgcggcgtgg
ccgcgctacacgggcacggccgtcgccggtgtgtccggcttcgggttcggtggcaccaac
gcgcacgtcgtcgtgcgcgagtacaccggacctgccgcggatgacgcggccgagatcacc
gagcccgctgttcccgccgaggaatcggtggccgaggccgtcgagcagacggtcgttctc
gccgtgtcgggtgcgctgccgtcgcgtcgtcgccgtgccgccgccgatctggccgactgg
ctggagaccgaagagggcagcaccactccgctcgccgacgtcgcgcgctctctcgcccgc
cgcaaccacggccgctcgcgtgccgtcgtcctggcgaagacccgctccgaggccgttacc
gggctccgcgccatcgccgccggaaagcctgggcagggtgtgttctcggcggattcgccg
tcgtcgaagggtgccgtctgggtcctgtcgggcttcggttcgcagcaccgcaagatggcc
aagcagctctacctggagaacccggtcttcgcggccgccatcgacgaggtcgacgcgctg
atcgaggacgaggccggctactccatgaaggagaagttcctcgacgacgcgatcgactac
gacgtcgagacctcccaggtcggcatcttcaccatccagatcggtctggcggccctgctg
cgtcaccacggcgcccagcccgaggccgtggtcggacactcgatgggtgaggctgccgcc
gcgtacatctcgggtggtctgccgctcgaggacgcggtgcgggtgatctgcgcccggtcc
cgcctcatgggagaggccgaggccacgctcgagggcgacgacatccgtctgatggcgctc
gtcgagtacagcgcgtccgagatcgagaccgttctcaccgacttcccgcacctcgaggtc
tgcgtgtacgcggcgccgacgcacaccgtgatcggtggccccgagcccgaggtcaacgcc
atcgtcgcgcgcgccgagggcgaggagaagatggcccgcgtcctcaagacgaagggcgcc
agccacacctcccaggtcgatccgctgctgggcgagctggccgcggaactggcgggcatc
gagccgaccaagttgaagctgggcgtgtactcgtcggtcgaccaggacacgtactaccgc
gccggccacgagccgatccaccgcgaggagtactggaccaagggtctgcgccacagcgtg
tacttcaccaacgccgtccgcctcgccgtgggcagcgggcacaccacgttcgtggagctg
gcgcccaaccctgtagccctgatgtccgtcgccgccaccgtgttcgacgccggtctgcac
gacatgcagctcatccagacgctcaagcgcaaggaggacgagccgctcggtgttctcgca
gcgctcgcgcagctgtacgtgcacgggcacgccgtcgacctgtcgtcgctgctccccgag
ggcgacttcgcgtccgttccgcggaccgcgtggatccgcaagccgtactgggtggagacc
cgcatcgattccagcggcaacacccgcgtccccggtgcgcacgtgtcgctgcccgacggc
cgccacgtgtgggaggtccaggcaggcgcggtcaccgacctgcccgcactggtcaccgcc
gccgcgtcgcaggtgctgtcggacgtgacgctcgccgcgtccgttctgcacgcccacgct
ccggcggagggcacgctcaccaccacgctcaacccgcatccgggtggcgcgtcgctgcag
gtgcacgcgaagagcggcccgagtttcacgctgctgttcgatgccgccgtcacgtccggt
gcggcgcttcccgaacccgtcgtcgcgccgccggtgcagtcgacctccccggtggaggag
ctgcccgaggtcgtcgaggacatcggtgagaagtgggacccgaacggttcgcagaccctc
gaggatcgtctggcgctgatcgtcgccgagtccatgggctacgccccagaagacctgccc
gccgagatcccgctcatcgagctgggcctcgactcgctgatggccgtccgcatcaagaac
cgtgtcgagtacgagttcgacatcccgcagttgcagctgcaggcggtccgggacgcgaat
ctgatggaggtcggcaagtacctgcgctacgcggtcgagaaccgcgaagaggtgcaggcg
ctggccgacaagcagaaggccgagaaggaagcggaggaggcggcagaggccgcgggggcc
gcggaggccgaccgtgacgcagaggccgctcgtgactccgaagtcgctgcgtccccgctc
gacgccgaggacacgtccgtggaggccgaggccgaggcgatcctcgcggcgaccccggtg
ccggagacggccgcggctcccgaggcagccgccgtggacagccaggaagcgttcgccgac
gcgaccggttccgacgttccgccgcgcgacgccgccgagcgcctgacgttcgccacgtgg
gccgtcgtcaccggcgagtccgccaagggcatcttcaacacgctgccgatcctgaacgac
gagacggctgagaagctggcggcgcggttgtcggaacgcgcgaacggtgagatcacgttc
gacgacgtcctcgactccaccaccatcgaggaactcgccaacgtggtgcgtggattcctc
gaggattccggcaagatcgacgggctggtccgcgcgctgcggcctcgcccggaaggatcc
gacgccgtccccgtgttcgtgttccacccggccggtggttcgaccgtcgcgtacgagccg
ctgctgaagcgtctgcccgagggcacgccgatgtacgggttcgaacgcaccgagggtccg
atcgaggtccgggcggcggagtacctgccgctgatccgcgagatccagggtgacggaccg
tacgtgctgtacggctggtcgctgggcggtgtgctggcgtacgcggtggcgaagctgctg
cgcgagtcgggcgcggacgttcgcatcgtcggcctgatcgacacggtgatggccggtgag
aaggtcgaggacaccccggacgagatccgtaagcgctggcagcggtacgccgcgttcgcg
aagaagacgtacaacgtggactacccgctgccatacgacaagctcgctgcggcggagagc
gacgaagagcagatcaagatcctgacggaactgctcaaactgagtggcacgaagattccg
ggtggaatcatcgagcaccaacgcacgtcgtggctcgacaaccgggccatccagaccgcc
gagctcgagcagtacgacggcgacgtcgtcctgtacatggccgaccgctaccacgacgac
gtgatgaacctggagcccgcgttcaagaccaggaagccggacggcggctggggcgacgcg
gtgaagaacctggagatcatccacgtgggcggcgatcacatccagatcgtcgacgagccg
tacatcgcgaaggtcggtgccgacctcaccaagaagctggcggcgatccaggccgccgga
accggagcgcatcagtga
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