Rhodococcus sp. DK17: PST05_21175
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Entry
PST05_21175 CDS
T11476
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rhdk Rhodococcus sp. DK17
Brite
KEGG Orthology (KO) [BR:
rhdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhdk03400
]
PST05_21175
DNA repair and recombination proteins [BR:
rhdk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PST05_21175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
WZV35908
LinkDB
All DBs
Position
complement(4471449..4471853)
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AA seq
134 aa
AA seq
DB search
MPATDPATSARMRAQRRRDTAPELALRRELHRRGVRYYVDRAPMKGVRRRADLVFPRRKV
AVYVDGCFWHSCPQHATFPKNNAQWWAEKLAGNVTRDRDTDTRLTDAGWTVVRVWEHENP
VVAANRVQEALGDA
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaccgatcccgcgaccagcgcccggatgcgggcgcagcggcgtcgcgacacc
gcacccgaactcgcactccgcagggaactgcaccggcgcggggtccggtactacgtggac
cgggcgccgatgaagggtgtccggcggcgcgccgacctggtgtttccgcggcggaaggtg
gccgtgtatgtggacgggtgcttctggcacagctgcccgcagcacgccacgttcccgaag
aacaacgcgcagtggtgggccgagaaactcgccgggaacgtcacccgcgatcgtgacacc
gacacgaggctgaccgacgccgggtggacggtggtgcgggtctgggagcacgagaatccg
gtggtcgcggcgaacagggtccaggaagctctcggcgacgcgtga
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