Rhodococcus sp. DK17: PST05_27205
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Entry
PST05_27205 CDS
T11476
Name
(GenBank) DegT/DnrJ/EryC1/StrS family aminotransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhdk Rhodococcus sp. DK17
Pathway
rhdk00260
Glycine, serine and threonine metabolism
rhdk00460
Cyanoamino acid metabolism
rhdk00630
Glyoxylate and dicarboxylate metabolism
rhdk00670
One carbon pool by folate
rhdk00680
Methane metabolism
rhdk01100
Metabolic pathways
rhdk01110
Biosynthesis of secondary metabolites
rhdk01120
Microbial metabolism in diverse environments
rhdk01200
Carbon metabolism
rhdk01230
Biosynthesis of amino acids
rhdk01240
Biosynthesis of cofactors
rhdk04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rhdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PST05_27205
09102 Energy metabolism
00680 Methane metabolism
PST05_27205
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PST05_27205
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PST05_27205
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PST05_27205
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PST05_27205
Enzymes [BR:
rhdk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PST05_27205
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
WZV37039
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All DBs
Position
5826237..5827598
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AA seq
453 aa
AA seq
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MTPRSTIAPWASPIAQQRLSTLETAHTETSTAQVVESVHRSLAEHHARINDGIVLYAGTN
VLSPNVTAAHDTALSTRPALGWPGEKVQTAVQEIEHLEVLATRQVAQALRGTYAEVRYLT
ATMANLAAYIAFTDPGDTIAVLSPESGGHASHQQILGTAGIRGLTVEHLPYSPSALDIDA
GEIDDFVHRLRPRLIVVGGSVTLFPHNLGPIREAADRVGAVVVYDASHTAGLIAAGYYQD
PLAEGADVVTFSTYKTFAGPAGGAAVTHSAEHAERLAAAAYPTMLSNYDPARLGPLAVAA
GEAVDQSPPWAAVTIEYAGELAANLNALGLVVVGRRLGYTRSHQVVIDAQGIGGASAAVR
RLEADGIYTGACRLPWQSPGTPPEGVRLGVQEFIRCGAGFDTVTDLAALVHRSLTTTDDT
PLTPATRHLRRQVTTDLWGRPAACPSTDEWSTV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacaccccgttcgaccatcgctccctgggcatcaccgatcgctcagcagcgtctgtcg
accctggagaccgcgcataccgagaccagcaccgcccaggtcgtcgaatcggtgcatcgg
tcgctggctgagcaccatgcgcggatcaacgatgggatcgtcctctacgccggcaccaac
gtcctgtccccgaatgtgacggccgcacacgacaccgcgctgtccacccgcccggcgttg
gggtggccgggggagaaggtgcagaccgcggtgcaggagatcgagcacctcgaggtgctc
gctacccgccaggtcgcccaggcgctgcggggaacctacgccgaggtgcggtacctgacc
gccaccatggccaacctcgccgcctatatcgcgtttaccgaccccggcgacaccatcgcc
gttctgtccccggaatccggcggccacgccagccatcaacagatactcggcaccgcgggc
attcgggggctgaccgtcgagcacctgccgtactcgccgagcgccctcgacatcgacgcc
ggggaaatcgacgacttcgtccaccggttacgaccgcggctgatcgtggtcggcggcagc
gtcaccctgttccctcacaacctcggaccgatccgcgaggccgccgaccgggtcggtgcc
gtcgtggtctacgacgcctcccacaccgcaggtttgatcgccgccggctactaccaggac
ccactcgccgagggcgccgatgtggtgacgttctcgacatacaagaccttcgccggcccc
gcgggcggcgccgccgtcacccactccgccgagcatgccgagcgcctcgccgccgccgca
tatccaacgatgctgtcgaactacgacccagcccgcctcggcccgctcgcagtagccgcc
ggtgaggcggtcgaccagtcgccgccgtgggccgcggtcaccatcgagtacgcaggcgag
ctggccgcgaacctcaacgcgctcgggctggtcgtcgtcggccgccgcctcggctacaca
cgcagccaccaggtcgtcatcgacgcccaaggcatcggcggggcgtcggccgcggtccgc
cggctcgaggccgacggcatctacaccggcgcatgccggctgccgtggcagagcccgggc
accccacccgagggcgtgcgcctgggcgtgcaggagttcatccgctgcggcgccgggttc
gacaccgtcaccgacctcgccgctctcgtgcaccgatccctcaccaccaccgacgacacc
ccactgaccccggcgacccggcacctgcgccgacaggtcaccaccgacctgtggggtcgt
cccgccgcttgtccatccaccgacgaatggagcaccgtctga
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