Rhodococcus sp. DK17: PST05_27785
Help
Entry
PST05_27785 CDS
T11476
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
rhdk Rhodococcus sp. DK17
Brite
KEGG Orthology (KO) [BR:
rhdk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PST05_27785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
WZV37141
LinkDB
All DBs
Position
5978742..5979884
Genome browser
AA seq
380 aa
AA seq
DB search
MAGRVVKRAFKYRFYPTAVQAEQLARTFGCTRYVYNRALAERSRAWSQERRRVTYADTSK
MLTGWKRDTETEWLSEPSKGPLQESLRQLQGAFDRFWRKQTRYPQFKRKGRSKDSATYYS
NCFTYRGGQIRLAKQSEPLDIRWSRPLPEGAVPSQVTVSRNARGQYHISILVEDTITELG
PIDHVVGLDAGITSLYTLSTGEKITNPRHERKDRERLAKAQRVLAKKEKGSCNRAKARQK
VAKIHGRIADRRRDYLHKLSTRLVRENQVIAIEDLSVRNMVKNRSLSRAISDASWSEFRS
MLEYKAGWYGRRVVAIDRFYPSSKACSVCGAIASTMPLNVREWACRCGAVHDRDVNAAKN
ILAVGLTVAACGDGVRPPRT
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcggggagggtggtgaagcgggcgttcaagtaccgtttctatccgactgcggtgcag
gcggaacagcttgctcggacgttcgggtgcacccggtatgtctacaaccgggcgttggcc
gagcgctcgcgtgcctggtcgcaggagcggcggcgggtcacctacgcggatacctcgaag
atgctcaccggatggaaacgggacaccgagaccgagtggttgtcggagccgtcgaagggg
ccgttgcaggagtcattgcggcagttgcagggcgcgttcgacaggttctggcgcaaacag
acccgctacccgcaattcaagaggaagggccggtcgaaggattcggcgacctactactcg
aactgcttcacctaccgcggcgggcagatccggttggccaagcagtccgaacccctggac
attcggtggtcgaggccgttaccggagggggccgtgccgtcgcaggtgacggtgtcgcgc
aacgctcgcggtcagtaccacatctcgatcctcgtcgaggacacgatcaccgagctcggg
ccgatagatcatgtggtcgggctcgatgccgggatcacgagcctctacacgctctcgacg
ggggagaagatcaccaacccgcgtcatgagcgcaaggaccgtgagcggttggcgaaggcg
cagcgggtgctggccaagaaggagaaaggatcctgtaaccgggctaaggcccgacaaaaa
gtcgcgaagatacatggccggatcgccgatcggcgtcgcgattatctgcacaaactctcc
actcggctggtgcgcgaaaaccaagtgatcgccatcgaggatctgagtgtgcggaacatg
gtgaagaatcggtcgttgtctcgggcgatctcggatgcgagttggtccgagttccggtcg
atgctcgagtacaaggccggctggtacgggcggcgggtggtggcgatcgaccggttctat
ccgtcgtcgaaggcctgctcggtgtgtggggcgatcgcctcgacgatgccgctgaacgtg
cgggagtgggcgtgccgatgcggcgccgtccatgatcgggatgtgaacgcggcgaagaac
attttggccgtcggactgacggtggcagcctgcggagatggtgtgagaccgccccgcaca
taa
DBGET
integrated database retrieval system
