Rhodococcus sp. DK17: PST05_31905
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Entry
PST05_31905 CDS
T11476
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
rhdk Rhodococcus sp. DK17
Brite
KEGG Orthology (KO) [BR:
rhdk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PST05_31905
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
WZV37926
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Position
6881322..6882464
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AA seq
380 aa
AA seq
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MAGRVVKRAFKYRFYPTAVQAEQLARTFGCTRYVYNRALAERSRAWSQEQRRVTYADTSK
MLTGWKRDTETEWLSEPSKGPLQESLRQLQGAFDKFWRKQTRYPQFKRKGRSKDSATYYS
NCFTYRGGQIRLAKQSEPLDIRWSRPLPEGAAPSQVTVSRNTRGQYHISILVEDTITELG
PIGHVVGLDAGITSLYTLSTGEKITNPRHERKDRERLAKAQRVLAKKEKGSCNRAKARQK
VAKIHGRIADRRRDYLHKLSTRLVRENQVIAIEDLSVRNMVKNRSLSRAISDASWSEFRS
MLEYKAGWYGRRVVAIDRFYPSSKACSVCGAIASTMPLNVREWACRCGAVHDRDVNAAKN
ILAVGLTVAACGDGVRPPRT
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcggggagggtggtgaagcgggcgttcaagtaccgcttctatccgactgcggtgcag
gcggaacagctagctcggacgttcggatgcacccggtatgtctacaaccgggcgttggcc
gagcgctcgcgtgcctggtcgcaggagcagcgacgggtgacctacgcggatacctcgaag
atgctcaccggatggaagcgggacaccgaaaccgagtggttgtcggagccctcgaaggga
ccgctgcaggagtcgctgcggcaattgcagggcgcgttcgacaagttctggcgcaaacag
acccgctacccgcaattcaagaggaagggccggtcgaaggattcggccacctactactcg
aactgcttcacctaccgcggcgggcagatccggttggccaagcagtccgaacccctggac
attcggtggtcgaggccgctaccggagggggccgcgccgtcgcaggtgacggtgtcgcgc
aatacccgtggtcagtaccacatctcgatcctcgtcgaggacacgatcaccgagctcggg
ccgataggtcatgtggtcgggctcgatgccgggatcacgagcctctacacgctctcgacg
ggggagaagatcaccaacccgcgtcatgagcgcaaggaccgtgagcggttggcgaaggcg
cagcgggtgctggccaagaaggagaaaggatcctgtaaccgggctaaggcccgacaaaaa
gtcgcgaagatacatggccggatcgccgatcggcgtcgcgattatctgcacaaactctcc
actcgactggtgcgcgaaaaccaagtgatcgccatcgaggatctgagtgtgcggaacatg
gtgaagaatcggtcgttgtctcgggcgatctcggatgcgagttggtccgagttccggtcg
atgctcgagtacaaggccggctggtacgggcggcgggtggtggcgatcgaccggttctat
ccgtcgtcgaaggcctgctcggtgtgtggggcgatcgcctcgacgatgccactgaacgtg
cgggagtgggcgtgccgatgcggcgccgtccatgatcgggatgtgaacgcggcgaagaac
attttggccgtcggactgacggtggcagcctgcggagatggtgtgagaccgccccgcaca
taa
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