Rhodococcus sp. DMU1: HFP48_10630
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Entry
HFP48_10630 CDS
T11419
Name
(GenBank) DEAD/DEAH box helicase
Organism
rhdm Rhodococcus sp. DMU1
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIX53207
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All DBs
Position
2252706..2255519
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AA seq
937 aa
AA seq
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MVGMLHGLWSPGAGLMLWRDGDDPPDDTPAVLRRWIDRPFRHRVELRLPGDDAPRRIPAV
AVAPPDAAELLLALPRHAEGVAGDLRYLAHVARGIERWAQAGRVAPELHRADGQWWARWR
LLGGDRIRAWTAELSAAMPPVQRQAGRPAALLDDLATELTDPITRALIGNVGTSLHPLIA
ALAEGQPHHSGSQRMAEALDEWRASLAGNEPDLVLRLVEPDDEEDGIGADTLWRLEVCLR
SEGQAPVPVPVDGSDAQLLQIGIRKLGAALKAYPRLQDVPRDPDSLDLLLPTGVVTDLVE
HGGRALGEAGVALLLPRAWARLEPSLRLQVSSPVAPVAAEDDTVGMNALVSFEWQLAVGD
MLLTPAEMERLIAANSDLVKLRGKWVQADPIALARAARYVAGQGATDATLATLFGRFTGD
EPPPVEVTDVAATGWVATLLDGQVRPEPVPPPPGLHATLRPYQQRGLEWLAFMSGLGLGA
VLADDMGLGKTVQVLALLAHERAGGDDVPPTLLVCPMSVVGNWQREAQRFVPGLRVHVHH
GPARLRDAALAAAVADSDLVITTYALVARDVAPLRSLRWGRVVLDEAQHVKNAATAQSRA
TRAIPARHRVALTGTPVENRLEELRSILDFANPRLLGSPSTFRARFAVPIERERDAAAAA
RLRALTSPFVLRRVKTDPSVISDLPEKFEQTVRANLTAEQAALYRAVVDEMMRQIRDKEG
MARKGAVLAALTRLKQVCNHPAHYLGDGSGVLRRGRHRSGKLGLVEDIVESILADGEKAL
LFTQFREFGELIAPYLAERFDTTVPFLHGGVSKGRRDAMVAAFQGDGGPPMMLLSLKAGG
TGLNLTAANHVVHLDRWWNPAVENQATDRAFRIGQRRDVQVRKLVCVGTLEERIDEMIAG
KQELAELAVGAGENWITELSTEQLHSLLSLGDEAVGE
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcatgctgcacgggctgtggtcaccgggagcgggcctgatgctgtggcgcgac
ggcgacgacccgcccgacgacacacccgctgtactgcgacgatggatcgaccggccgttc
cggcaccgcgtcgagctgcgtctgcccggcgacgacgctccgcggcggatccccgcggtg
gcggtcgcgccgcccgacgccgcggagctgctgctggcgctgccgcggcacgccgagggg
gtggccggggacctgcgctacctcgcccacgtcgcccgcggcatcgagcgctgggcgcag
gccgggcgggtggccccggaactgcaccgcgccgacgggcagtggtgggcccggtggcgc
ctgctcggcggcgaccggatccgggcctggacggccgagctgtccgccgcgatgccgccg
gtgcagcggcaggccggccggcccgcggcgctcctcgacgacctcgccaccgagctcacc
gatccgatcacccgggcgttgatcggcaacgtgggtacctcgctgcatccgctgatcgcc
gccctggccgaggggcagccgcaccacagcggctcccagcgcatggccgaggcgctggac
gaatggcgggcctcgctcgccggaaacgagcccgacctggtgctgcggctcgtcgaaccg
gacgacgaggaggacggcatcggcgccgacacgctgtggcggctcgaggtgtgcctgcgg
tcggaggggcaggcgccggtgccggtgccggtggacggctccgacgcgcagctgctgcag
atcgggatccgcaagctcggcgccgccctgaaggcgtatccgcggctgcaggacgtgccg
cgcgacccggacagcctggacctgctgctgccgacgggggtcgtgaccgacctcgtggag
cacggtggccgtgcgctgggtgaggccggcgtcgcgttgctgctgccgcgcgcgtgggcg
cggctcgagccgtcgctgcggctgcaggtgtcctcgccggtcgcacccgtcgccgccgag
gacgacaccgtcggcatgaacgcgctcgtctcgttcgagtggcagcttgccgtgggcgac
atgctgctcacccccgccgagatggaacggctgatcgcggccaacagcgacctggtcaag
ctgcgcggcaagtgggtgcaggccgatccgatcgcgctcgcgcgggccgcccgctacgtc
gccggccagggcgcgacggacgcgacgctggcgacgttgttcggccggttcaccggcgac
gagccgccaccggtggaggtcaccgacgtcgccgcgaccggctgggtggcgaccctgctc
gacgggcaggtccggcccgaaccggtgccgcccccacccggcctgcacgcgaccttgcgt
ccgtaccagcagcgcggcctggagtggctggcgttcatgagcggcctcgggctgggcgcg
gtgctggccgacgacatgggcctcggcaagaccgtgcaggtgctcgcgctgctcgcccac
gaacgggcgggcggcgacgacgtgcccccgacgttgctggtgtgcccgatgtcggtggtg
ggcaactggcagcgcgaggcccagcggttcgtcccgggcctgcgcgtgcacgtccaccac
ggcccggcgcggttgcgcgacgccgcgctggccgcggcggtcgccgacagcgacctggtg
atcacgacgtacgcgctcgtcgcgcgtgacgtggcgccgttgaggtcgctgcgctggggc
cgggtggtgctcgacgaggcccagcacgtgaagaacgccgcgaccgcgcagtcccgcgcg
acgcgggcgatccccgcgcggcaccgcgtcgcgctcaccggcacccccgtggagaaccgg
ctcgaggaactgcgatcgatcctcgacttcgccaatccccgcctgctgggttcgccgtcg
acgttccgggcccggttcgccgtcccgatcgagcgggagcgcgacgcggccgccgccgcg
cggctgcgggcgttgacgtcgccgttcgtgcttcgccgcgtcaagaccgatccgtcggtg
atctcggacctgccggagaagttcgagcagacggtgcgggccaacctgaccgccgagcag
gcggcgctgtaccgggcggtggtcgacgagatgatgcggcagatccgggacaaggagggc
atggcccgcaagggcgcggtgctcgccgcgctgacccggctcaagcaggtgtgcaatcac
cccgcgcactacctgggcgacggctccggggtgctgcggcggggccggcaccgttcgggc
aagctcgggctggtggaggacatcgtcgagtcgatcctcgccgacggcgagaaggcgctg
ctgttcacccagttccgggaattcggtgagctgatcgccccgtatctcgccgagcggttc
gacaccacggtgccgtttctgcacggcggggtgtccaagggccggcgcgacgcgatggtc
gccgcgttccagggcgacggcggcccgccgatgatgctgctctcgctcaaggccggcggc
acgggcctgaacctgacggccgcgaatcacgtggtgcacctggatcgttggtggaatccg
gcggtggagaaccaggccaccgaccgggcgttccgcatcggccagcgccgcgacgtgcag
gtccgcaagctcgtgtgcgtcggcacgctggaggaacggatcgacgaaatgatcgcgggg
aaacaggaattggcggagcttgcggtgggagcgggcgagaactggatcaccgagctgtcc
accgagcagctgcactcgctgctgtccctgggcgacgaggcggtgggcgagtga
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