Rhodococcus sp. DMU1: HFP48_12140
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Entry
HFP48_12140 CDS
T11419
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhdm Rhodococcus sp. DMU1
Pathway
rhdm00061
Fatty acid biosynthesis
rhdm00071
Fatty acid degradation
rhdm01100
Metabolic pathways
rhdm01212
Fatty acid metabolism
rhdm02024
Quorum sensing
rhdm04146
Peroxisome
Module
rhdm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HFP48_12140
00071 Fatty acid degradation
HFP48_12140
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HFP48_12140
09145 Cellular community - prokaryotes
02024 Quorum sensing
HFP48_12140
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhdm01004
]
HFP48_12140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhdm04147
]
HFP48_12140
Enzymes [BR:
rhdm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HFP48_12140
Lipid biosynthesis proteins [BR:
rhdm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HFP48_12140
Exosome [BR:
rhdm04147
]
Exosomal proteins
Exosomal proteins of breast milk
HFP48_12140
Exosomal proteins of breast cancer cells
HFP48_12140
BRITE hierarchy
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GFIT
Other DBs
NCBI-ProteinID:
QIX50222
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Position
2584145..2585827
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AA seq
560 aa
AA seq
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MGTGMERIWLDSYAEGVPSDIAPPEHSLVDMLEASVARFGPRPALEFFGAELTYSQLGDR
VHRAAEGLRRLGVRPGDRVALVLPNCPEHVIAFYAVLRIGGVVVEHNPLYTGEEMAHQFA
DHGATVAVAWDKVCPLLQRIAGDTAVEHIVAVNITRSMPWSKRLALTLPVPRARALRDAL
TGPAPGTIPWQRLLADGPLDPEHPRPSVGDLAVVQYTSGTTGTPKGAMLTHSNLGANAAQ
GRAWVPGLVDGAEVVYAVLPMFHAYGLTLCVTFAMSIGARLVLFPKFDVDLVLAAAKKHP
PTFMPAVPPIYERLARAARERSVDLTSARWSISGAMPLPTETLELWEAVTGGVLVEGYGL
TETSPVAVGNPIGLARRPGAVGVPFPSTEIRVVDPADPERDVEPGQRGELLIRGPQVFSG
YWNKPEQTAEALLDGGWFRTGDIVQVDRDGFVTVVDRIKELIITGGFNVMPSEVEAALRL
FPGVVDAAVVGLPTPDGSEEVVAAVLVSGDDFDPEAAREHCRSRLAAYKVPRRVVVVDDL
PRSLIGKVLRRQVRESLLVG
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaccggtatggaacggatctggctcgacagctacgccgagggggtgccgtcggac
atcgcaccccccgagcactcgctggtcgacatgctggaggcgtcggtcgctcggttcggg
ccacgtccggcgctcgagttcttcggcgcggaactgacctattcgcaactcggcgaccgg
gtgcaccgtgccgcggaggggctgcgacggctcggcgtgcgccccggcgaccgggtggcg
ctcgtcctgccgaactgtccggagcacgtgatcgcgttctatgcggtcctgcggatcggc
ggcgtggtggtcgagcacaatccgctctacaccggcgaggagatggcccaccagttcgcg
gaccacggcgccacggtggcggtcgcctgggacaaggtctgtccgctgctgcagcggatc
gccggggacacggccgtcgagcacatcgtggcggtgaacatcactcgttcgatgccgtgg
tccaagcggctcgcgctcaccctccccgtcccgagagcgcgcgcgttgcgggacgcgctg
acggggccggcgccggggacgattccgtggcagcggttgctggccgacggacccctcgac
ccggagcatccgcgcccctccgtcggcgatctggcggtcgtccagtacacgagcggcacc
accggcaccccgaagggcgcgatgctcacgcactcgaacctcggcgccaacgccgcgcag
ggccgcgcctgggtgccggggctggtcgacggcgcagaggtcgtctacgcggtgctgccg
atgttccacgcctacgggctcaccctgtgtgtgaccttcgcgatgagcatcggcgcccgt
ctggtgctgttccccaagttcgacgtggatctggtgctcgccgccgcgaagaagcaccca
cccacgttcatgcccgcggtgccgccgatctacgagcgcctcgcccgcgcggcccgggag
cggtcggtggatctgacgtcggcgcgctggtcgatttccggggcgatgcccttgccgacg
gagacactggaactgtgggaggcggtcaccgggggcgtgctggtcgaggggtacgggctg
accgagacgtcgccggtcgcggtcggcaatcccatcggactcgcccgccggcccggtgcg
gtcggagttcccttcccgagcaccgagatccgggtggtcgatccggccgaccctgagcgc
gacgtcgaacccgggcagcggggagagctgctgatccgcggaccgcaggtgttctccgga
tactggaacaagcccgaacagacggcggaggcgctgctcgacggcggctggttccggacc
ggtgacatcgtccaggtcgaccgcgacggattcgtcacggtcgtggaccggatcaaggaa
ctgatcatcaccggtggcttcaacgtcatgccgtccgaggtcgaagcggcgctgcggctg
ttcccgggagtagtcgacgccgccgtggtgggtctgccgacccctgacggcagcgaggag
gtggtggcggcggtgctggtctcgggcgacgacttcgaccccgaggcggcgcgggagcac
tgccgttcgcgcctggccgcctacaaggtcccgcggcgtgtggtggtggtggacgacctg
ccgcggtccctgatcgggaaggtgctccgccggcaggtccgcgagtccctcctcgtcggc
tga
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