KEGG   Rhodococcus sp. DMU1: HFP48_12360
Entry
HFP48_12360       CDS       T11419                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
rhdm  Rhodococcus sp. DMU1
Pathway
rhdm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rhdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HFP48_12360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rhdm03019]
    HFP48_12360
Messenger RNA biogenesis [BR:rhdm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HFP48_12360
SSDB
Other DBs
NCBI-ProteinID: QIX53241
LinkDB
Position
2632432..2634120
AA seq 562 aa
MSGRLGTPPKAPPKGLRVVALGGIGEIGRNMTVFEHQGRLLVIDCGVLFPEDQQPGVDLI
LPDFRHIEDRMDDVEAVVLTHGHEDHIGAVPFLLRLRPDIPVVGSKFTLALVAAKCREHR
LRPNLVEVVEGDKTTHGPFECEYFAVNHSIPDALAVAVRTEAGLVLHTGDIKLDQLPLDG
RLTDLAGFSRLGDEGVDLFLVDSTNAEVPGFVMPEREIGGVLDNVIGKATQRVIVASFAS
HVHRIQQVVDVAGRYNRRIAFVGRSMVRNMQIAQDLGYLRVPDGLVVDLDTAATLPDNRL
VLISTGSQGEPLSALSRMARGEHRQINIKADDLVILASSLIPGNENSVFAVVNGLAKRGA
TVVTQQNAKVHVSGHASAGELLYLYNAVRPTNAMPVHGEWRHLRANAALAEATGVPRDRI
VLAEDGVVVDLVDGLAEIVGQVPVGHVYVDGLSVGDVGESTLSDRLILGEGGFISISVAV
DENGRAVSTPGVSGRGFSDDPGALSEAAQLVDKVLNELAAEGIDDAHRIAQAIRRVVGRW
VSDTYRRRPMIVPTVITVPGPA
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgtcggggcgcctcggcaccccgccgaaggcgccgccgaagggcctgcgcgtcgtcgcg
ctcggcggcatcggcgagatcggccgcaacatgacggtcttcgagcatcagggccggctc
ctcgtcatcgactgcggcgtgctcttccccgaggaccagcagcccggcgtcgacctgatc
ctgccggacttccggcacatcgaggaccgcatggacgacgtcgaagccgtcgtcctcacc
cacggccacgaggatcacatcggggcggtgccgttcctgctgcgcctgcgtcccgacatc
ccggtcgtgggctcgaagttcaccctcgcgctcgtcgccgcgaaatgccgcgagcaccgg
ctgcggcccaacctcgtcgaagtcgtcgagggggacaagaccacgcacggcccgttcgag
tgcgagtacttcgccgtcaaccactcgatcccggacgcgctcgccgtcgccgtccgcacc
gaggccgggctcgtgctgcacaccggcgacatcaagctcgaccagttgccgctcgacggc
cgcctcaccgacctcgccggattctcccggctcggcgacgagggcgtcgacctgttcctc
gtcgactccaccaacgccgaggtgccgggcttcgtgatgcccgaacgcgagatcggcggc
gtcctggacaacgtcatcggcaaggccacccagcgcgtgatcgtcgcctccttcgccagc
cacgtgcaccgcatccagcaggtcgtcgacgtcgccgggcggtacaaccgccgcatcgcc
ttcgtcggacggtcgatggtgcgcaacatgcagatcgcgcaggacctcggctacctgcgg
gtgccggacgggctcgtcgtcgatctcgacaccgccgcgacattgcccgacaaccggctc
gtgctgatctccaccggctcgcagggtgaaccgctgtccgcgctgtcgcgcatggcgcgc
ggcgagcaccgccagatcaacatcaaggccgacgatctcgtcatcctggcttcctccctg
atcccgggcaacgagaattcggtgttcgcggtcgtcaacggcctcgccaagcgaggcgcc
accgtcgtcacccagcagaacgcgaaggtgcacgtctccggccacgcctccgcgggcgag
ctgctgtacctgtacaacgcggtgcgcccgacgaatgcgatgccggtgcacggcgaatgg
cggcacctgcgggccaacgcggcgctggccgaggcgaccggggtgccgcgggaccggatc
gtgctcgccgaggacggcgtggtcgtcgacctcgtcgacgggctcgcggagatcgtcgga
caggtacccgtcggccacgtctacgtcgacggcctgtccgtcggtgacgtcggcgaatcg
accctgtcggaccggttgatcctcggcgagggcggcttcatctccatctccgtcgccgtg
gacgagaacggtcgcgccgtgagtaccccgggggtgtccggccgcggcttctccgacgac
ccgggagcgctctccgaggccgcgcaactcgtggacaaggtcctcaacgagctcgccgcc
gagggtatcgacgacgcccaccgcatcgcccaggcgatccgccgtgtcgtcgggcgctgg
gtgtccgacacctaccgtcgccggccgatgatcgtgccgacggtgatcaccgtcccgggc
ccggcgtag

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