Rhodococcus sp. DMU1: HFP48_14270
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Entry
HFP48_14270 CDS
T11419
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rhdm Rhodococcus sp. DMU1
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rhdm03051
]
HFP48_14270 (pafA)
Enzymes [BR:
rhdm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
HFP48_14270 (pafA)
Proteasome [BR:
rhdm03051
]
Prokaryotic proteasome
Bacterial regulatory particles
HFP48_14270 (pafA)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QIX53273
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Position
3056453..3057796
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AA seq
447 aa
AA seq
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MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDDLLQLVEHDHAGERVLEELLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSYGCHEN
YLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATYCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMSEPTTMLKVGSASLVLEMIEAGVAFRDFAL
DNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYHGRAVEYLRTREPDPHVEQVVDL
WGRVLDAVESQDFAKVDTEIDWVIKRKLFQRYQDRYDLELSDPKIAQLDLAYHDIKRGRG
VFDLLQRKGLAARLTDDESVDAAVHTPPQTTRAKLRGDFIAAAQDAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcgagacggagttcggcgtcacgtgcaccttccacgggcaccggcggctgagc
cccgacgaggtcgcccggtatctgttccgtcgggtggtgtcctggggccgcagctcgaac
gtgttcctccgcaacggggcgcgcctgtacctggacgtgggttcgcacccggagtacgcg
accgccgaatgtgacgaccttctccagctcgtcgagcacgaccacgccggggagcgggtg
ctcgaggaattgctgatcgacgccgaacagcgcctcgccgaggaaggcatcggcggcgac
atctacctgttcaagaacaacaccgactcggccggcaactcctacggctgccacgagaac
tacctcgtggtgcgggccggggagttctcccgcatctcggacgtgctgctgccgttcctg
gtgacgcggcagctgatctgcggcgccgggaaggtgctgcagacccccaaggccgcgacc
tactgcctgtcgcagcgcgccgagcacatctgggagggcgtgtcgtcggcgaccacccgg
tcccggccgatcatcaacacccgcgacgagccgcacgccgacgccgagaagtaccggcgg
ctgcacgtgatcgtcggcgactcgaacatgtccgagcccaccacgatgctcaaggtcggc
tccgcgtcgctggtgctcgagatgatcgaggccggcgtggcgttccgcgacttcgccctc
gacaacccgatccgggccatccgggaggtcagccacgacctgaccgggcggcggccggtg
cgcctggccgggggccggcaggccagcgccctcgacatccagcgcgagtaccacggccgg
gcggtggagtacctgcgcacccgcgaacccgatccgcacgtcgagcaggtggtggatctg
tggggccgggtgctcgacgcggtcgagtcgcaggacttcgcgaaggtggacaccgagatc
gactgggtgatcaaacgcaagttgttccagcgctatcaggaccgctacgacctggagctg
tccgacccgaagatcgcccagctggatctggcgtaccacgacatcaagcgcgggcgcggg
gtgttcgatctgctccagcgcaaggggctggcggcgcggctgaccgacgacgagtccgtc
gacgcggccgtgcacaccccgccgcagaccacccgggcgaagctgcgcggcgacttcatc
gccgccgcgcaggacgccggccgggacttcaccgtcgactgggtgcacctcaagctcaac
gaccaggcgcagcgcacggtgctgtgcaaggacccgttccgctccgtcgacgagcgcgtc
gaacggctcatcgcctcgatgtag
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