Rhodococcus sp. DMU1: HFP48_15570
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Entry
HFP48_15570 CDS
T11419
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rhdm Rhodococcus sp. DMU1
Pathway
rhdm00020
Citrate cycle (TCA cycle)
rhdm00190
Oxidative phosphorylation
rhdm00650
Butanoate metabolism
rhdm00720
Other carbon fixation pathways
rhdm01100
Metabolic pathways
rhdm01110
Biosynthesis of secondary metabolites
rhdm01120
Microbial metabolism in diverse environments
rhdm01200
Carbon metabolism
Module
rhdm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhdm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhdm_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HFP48_15570
00650 Butanoate metabolism
HFP48_15570
09102 Energy metabolism
00190 Oxidative phosphorylation
HFP48_15570
00720 Other carbon fixation pathways
HFP48_15570
Enzymes [BR:
rhdm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HFP48_15570
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
HI0933_like
Thi4
FAD_oxidored
GIDA
Pyr_redox_3
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QIX50824
LinkDB
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Position
complement(3374470..3376386)
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AA seq
638 aa
AA seq
DB search
MADVERHSYDVVVIGAGGAGLRAVIEARQRGLRVAVVCKSLFGKAHTVMAEGGCAAAMGN
ANPHDSWQVHFQDTMRGGKFLNNWRMAELHAREAPDRVWELETYGALFDRTPDGRISQRN
FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDHAATGDYDARVRVFAECTVTELLKD
AEGRIAGAFGYWRESGRFVLFEAPAVVVATGGIGKSWKVTSNSWEYTGDGHALALRAGAA
LINMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSENERFMFSYIPPVFKGQYAET
EEEADRWYTDQENNRRTPDLLPRDEVARAINSEVKAGRGTPHGGVFLDIASRMPAEEIVR
RLPSMHHQFKELADVDITAEAMEVGPTCHYVMGGIEVDPETGAASVPGLFAAGECSGGMH
GSNRLGGNSLSDLLVFGRRAGLGAADYVQGLGHRPRVAEADVTAAARTALAPFDPAEPAT
AENPYTLHTGLQQSMQDLVGIIRRADEIARALDVLGALRARIRNVAVEGHRQFNPGWHLA
LDLRNMLLVSECVARAALLRTESRGGHTRDDHPSMDPNWRRTLLVCRTDGGDESIPDVTV
APEQQVPMRPDLLALFDFEELAKYYTDDELAEHPGRRP
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgaacggcacagctacgacgtggtggtcatcggcgcgggcggggcgggg
ctgcgcgccgtcatcgaggcgcgtcaacgcggactgcgggtcgcggtcgtgtgcaagtcg
ctgttcggtaaggcgcacaccgtcatggcggagggcggttgcgccgccgcgatgggcaac
gccaacccgcacgactcgtggcaggtgcacttccaggacaccatgcgaggaggcaagttc
ctcaacaactggcgcatggccgaactgcacgcccgcgaggcgcccgaccgggtgtgggaa
ctcgagacctacggtgcgttgttcgaccgcacccccgacggccggatcagccagcgcaac
ttcggcggtcacacctatccgcggctggcgcacgtcggtgaccgcaccggcctcgagctg
atccgcacgatgcagcagaagatcgtgtccctgcagcaggaggaccacgccgccacgggc
gactacgacgcccgggtgcgggtgttcgccgaatgcaccgtcaccgaactgctgaaggac
gccgagggccgcatcgccggtgcgttcgggtactggcgcgagtccggccgcttcgtgctg
ttcgaggcgcccgccgtcgtcgtggccaccggcgggatcggcaagtcctggaaggtgacg
tcgaactcgtgggagtacaccggcgacggtcacgctctcgcgctgcgggccggggccgcc
ctgatcaacatggagttcgtccagttccaccccaccgggatggtgtggccgccgagcgtc
aagggcatcctcgtcaccgagggggtgcgcggcgacggcggggtcctgaagaactccgag
aacgagcggttcatgttctcgtacatcccaccggtgttcaaaggccagtacgcggagacg
gaggaggaggccgaccgctggtacaccgaccaggagaacaaccgccgcaccccggacctg
ttgccgcgcgacgaggtcgcccgcgccatcaattccgaggtcaaggccggtcgcggcacc
ccgcacggcggggtgttcctcgacatcgcctcgcgcatgcccgccgaggagatcgtccgg
cggctgccgtcgatgcaccaccagttcaaggagctcgccgacgtcgacatcaccgcggag
gcgatggaggtcggccccacctgccactacgtgatgggcggcatcgaggtcgatccggag
accggtgccgcgtccgtgcccggcctgttcgccgccggcgagtgctcgggcggcatgcac
gggtcgaaccggctcggcggcaactccctgtcggatctgttggtgttcggccggcgcgcc
ggcctcggcgccgccgactacgtgcagggcctcgggcaccgcccgcgcgtcgccgaggcg
gacgtcacggccgcggcgcgcacggcgctggccccgttcgatcccgccgagcccgcgacg
gcggagaacccctacaccctgcacaccgggctgcaacagtccatgcaggacctggtgggc
atcatccggcgcgccgacgagatcgcccgtgccctcgacgtcctcggcgcgttgcgggcg
cggatccggaacgtcgccgtggaggggcatcggcagttcaatcccggctggcacctcgcc
ctggacctgcgcaacatgctgctcgtgagcgagtgcgtggcccgggcggcgttgctgcgc
accgagagccgcggcgggcacacgcgcgacgatcatccgtcgatggacccgaactggcgc
cggacgctgctcgtgtgccgcacggacggtggtgacgagtcgatcccggatgtcacggtg
gcacccgaacagcaggtgcccatgcgaccggacctgttggcgctgttcgatttcgaggaa
ctcgccaagtactacaccgacgacgaactcgcggaacatccgggacggaggccgtag
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