Rhodococcus sp. DMU1: HFP48_16785
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Entry
HFP48_16785 CDS
T11419
Name
(GenBank) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
rhdm Rhodococcus sp. DMU1
Pathway
rhdm00260
Glycine, serine and threonine metabolism
rhdm00270
Cysteine and methionine metabolism
rhdm00450
Selenocompound metabolism
rhdm00670
One carbon pool by folate
rhdm01100
Metabolic pathways
rhdm01110
Biosynthesis of secondary metabolites
rhdm01230
Biosynthesis of amino acids
Module
rhdm_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HFP48_16785
00270 Cysteine and methionine metabolism
HFP48_16785
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HFP48_16785
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HFP48_16785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhdm04147
]
HFP48_16785
Enzymes [BR:
rhdm01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
HFP48_16785
Exosome [BR:
rhdm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HFP48_16785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
GDC-P
Motif
Other DBs
NCBI-ProteinID:
QIX51034
LinkDB
All DBs
Position
complement(3653788..3654909)
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AA seq
373 aa
AA seq
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MPGDSTRCVKAVAAEHIPGAPLQPGPVLAAPYQLGAEGTETDTYARASNPGWRALESALA
ALEGAAAARVVGSGMSAVTVALRALTRGGGTVVVPADGYYQVREYARERLEPLGITVHEL
TAAQFGDGSLRAVLAGAGEGALVLAETPSNPGLDVVDLRATAALCRTAGALLLVDNTTAT
PLGQQPLALGADIVVASGTKSLSGHSDLLMGYLAVADDALVPALDRERLLSGTVLGPFET
WLAHRSLGTAGLRFDRQCANALAAASMLREHPAVRGVRYPGLGDDPAHPVAAAQMRRFGP
LVTFRLDGEQQFHRFVAASELVTAATSFGGIHTTADRRARWGDPVPAGFVRLSCGIEDTA
DLLDDLDRALSRC
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgccgggtgactccacacgctgcgtgaaagcggttgctgccgaacatattccaggggct
ccgctgcagcccggtccggtcctcgccgccccctaccagctcggcgcggagggcacggag
accgacacctacgcccgcgcctcgaatcccggttggcgtgccctcgaatccgcgctggcc
gcgctcgagggcgcggccgcggcccgggtcgtcgggtccgggatgtccgcggtcaccgtc
gcgctgcgggcgctgacccgtggcggcggcaccgtcgtcgtccccgccgacgggtactac
caggtgcgcgaatacgcgcgggaacgcctcgagcccctcgggatcacggtccacgaactc
accgccgcccagttcggcgacggcagtctccgcgctgtcctcgccggcgccggcgagggc
gcgctcgtgctggccgagaccccgtcgaacccgggactggacgtcgtcgatctgcgcgcc
accgcggcgctgtgccggacggccggcgccctgctgctggtggacaacaccaccgccacc
ccgctggggcagcagccgctcgcgctgggcgcggacatcgtcgtcgccagcggcacgaaa
tcgctcagcgggcacagcgatctgctgatggggtacctcgctgtcgccgacgatgcactc
gtgccggccctcgaccgggagcgcctgctctccgggaccgtcctcggcccgttcgagacg
tggctggcgcaccgcagcctgggcaccgccgggctgcgcttcgaccggcagtgcgccaac
gcgctcgccgcggcgtcgatgctgcgcgagcatcccgccgtgcgcggcgtccgctacccc
ggtctgggcgacgatcccgcccaccccgtcgccgcggcacagatgcgccggttcgggccg
ctggtgacgttccggctcgacggcgaacagcagttccaccggttcgtcgcggcgagcgag
ctcgtcaccgccgcgaccagtttcgggggcatccacaccaccgccgaccggcgcgcccgc
tggggcgatcccgtaccggccggcttcgtgcgattgtcctgcgggatcgaggacaccgcc
gacctgctcgacgatctcgaccgcgcgctctcccggtgctga
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