Rhodococcus sp. DMU1: HFP48_16810
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Entry
HFP48_16810 CDS
T11419
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rhdm Rhodococcus sp. DMU1
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhdm03032
]
HFP48_16810
03036 Chromosome and associated proteins [BR:
rhdm03036
]
HFP48_16810
03400 DNA repair and recombination proteins [BR:
rhdm03400
]
HFP48_16810
DNA replication proteins [BR:
rhdm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HFP48_16810
Chromosome and associated proteins [BR:
rhdm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HFP48_16810
DNA repair and recombination proteins [BR:
rhdm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HFP48_16810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QIX51039
LinkDB
All DBs
Position
complement(3660021..3660755)
Genome browser
AA seq
244 aa
AA seq
DB search
MNKAELIDVLTEKLGSDRRTATAAVEHMVDAIVRAVHSGKSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGSQKLPATGPAVKRGAAAAAKKTAAAKKTA
AKKTAAAKKTAAKAAPAKKATTAAKAPAKTTAAKKTTAAKAPAKTTAAKKTTAAKKTTAA
KAPAKTTAAKKTTAAKKTTAAKAPAKTTAAKKTTAAKKTTAAKAPAKKTTAAKKAPARKA
AAKK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctgatcgatgttctgaccgaaaaactcggttcggacaggcgcact
gcaacggcggccgtggagcacatggtcgacgcgatcgtgcgcgcagtgcactcgggtaag
agcgtcacgatcaccggcttcggcgtcttcgagcagcgccgccgcgcggcgcgggtcgcg
cgcaacccgcgcacgggtgagaccgtgaaggtcaagccgacgtcggtgccggcgttccgc
cccggcgcgcagttcaaggcggtcatcgccggcagccagaagctccccgcgaccggtccg
gccgtcaagcggggcgcggctgccgcggcgaagaagaccgcggccgcgaagaagaccgcg
gccaagaagaccgcggcggcgaagaagactgccgccaaggcagctccggcgaagaaggcg
accacggcggccaaggctccggccaagaccaccgcggcgaagaagaccacggcggccaag
gctccggccaagaccaccgcggccaagaagaccacggcggcgaagaagaccacggcggcc
aaggctccggccaagaccaccgcggccaagaagaccaccgcggcgaagaagaccaccgcg
gccaaggctccggccaagaccaccgcggccaagaagaccaccgcggcgaagaagaccacc
gcggccaaggctccggccaagaagaccaccgcggccaagaaggcgccggcccggaaggct
gcagccaagaagtag
DBGET
integrated database retrieval system
