Rhodococcus sp. DMU1: HFP48_18640
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Entry
HFP48_18640 CDS
T11419
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rhdm Rhodococcus sp. DMU1
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhdm03016
]
HFP48_18640 (truA)
Enzymes [BR:
rhdm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HFP48_18640 (truA)
Transfer RNA biogenesis [BR:
rhdm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HFP48_18640 (truA)
Prokaryotic type
HFP48_18640 (truA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QIX51361
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Position
complement(4039778..4040725)
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AA seq
315 aa
AA seq
DB search
MVSASAEANEPVAPHGGGGPVAFENPSAVAVDTTRLRLDIAYDGTDFSGWARQPGRRTVC
GEIEEKLGAIVRAPVQLTVAGRTDAGVHASGQVAHVDVPTAAIPDDLVRLVRRLARFLPR
DVRITGISVAPPHFDARFSAIRRHYEYRLTTAVYGADPLRARDTVAWPKPVDVDAMRAAS
TSLLGLHDFAAFCKRRDGATTVRELQRFDWTVSGGRAAGAGPDVGVILTAHVSADAFCWS
MVRSLVGAALAVGEGRRSVEWMTALLDERERAAAVAVAPAHGLSLVGVDYPADDDLAARN
AATREMRGPISPGCC
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttggtttcggcatccgctgaagcgaacgagcccgtcgccccccacgggggcggcgggccc
gttgctttcgagaacccttccgccgtcgccgtggacaccacccggctgcggctcgacatc
gcctacgacggcaccgacttctccggctgggcgcgtcagcccggacggcggacggtgtgc
ggggagatcgaggagaagctcggtgcgatcgtgcgcgcgccggtgcagctcaccgtcgcc
ggccgcaccgacgccggggtgcacgcctccggtcaggtcgcgcacgtcgacgtccccacc
gccgcgattccggacgacctcgtccgcctggtgcgccgtctcgcccggttcctgccccgc
gacgtccgcatcaccggcatctccgtcgccccgccgcacttcgacgcccgcttctcggcg
atccgccggcactacgagtaccggctcaccaccgccgtgtacggggcggaccccctgcgg
gcccgcgacaccgtcgcctggcccaagccggtggacgtggacgcgatgcgcgcggcgtcg
acctcgctgctgggcctgcacgacttcgcggccttctgcaagcggcgcgacggggcgacg
acggtccgcgaactgcagcgcttcgactggacggtgtccggcggtcgcgcggcgggcgcc
ggtccggacgtcggcgtgatcctcaccgcgcacgtgagcgcggacgcgttctgctggtcg
atggtgcgcagcctcgtcggcgcggcgctggccgtgggggaggggcggcgcagtgtcgaa
tggatgaccgcactgctcgacgaacgggagcgtgccgcggcggtggccgtggccccggcg
cacgggctcagtctcgtcggcgtcgactatcccgccgacgacgacctcgcggcgcgcaac
gcggccacccgcgagatgcgcgggcccatcagccccggctgctgctga
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