Rhodococcus sp. DMU1: HFP48_24605
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Entry
HFP48_24605 CDS
T11419
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rhdm Rhodococcus sp. DMU1
Pathway
rhdm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HFP48_24605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhdm03400
]
HFP48_24605
Enzymes [BR:
rhdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HFP48_24605
DNA repair and recombination proteins [BR:
rhdm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HFP48_24605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
AAA_SpoVK_2nd
Motif
Other DBs
NCBI-ProteinID:
QIX52388
LinkDB
All DBs
Position
complement(5402681..5403544)
Genome browser
AA seq
287 aa
AA seq
DB search
MSVALRLAVTPPLATAPMLAALRSHTVAGLERHDAATGTHVRSVRGRHGPAVVAIRPRPA
AEHVPVRIDADRRDLPEVEQLVRRWLDLDAEPAVIDAALGADPQLAPMVAARPGLRVLGT
TDWFDTAVQTVLGQQVSVAAAATFAGRLVARYGDPGSGAMRCFPAPERLAAADADEVQGA
VGLTRARVRTVLALARAAADGLDPAEPVRFRTDLAALPGIGPWTVDYLAVRVLGDRDAYP
AGDLVLRRALGVGSAREATVRARQWSPWRAYAAFHLWTHSAYGSSSP
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcgccctgcggttggcggtgaccccgccgctggccaccgccccgatgctggcg
gccctgcgcagccacaccgtcgccggtctcgaacgacacgacgcggccaccggcacgcac
gtgcggtcggtgcggggccggcacggcccggcggtggtcgcgatccggccccggccggcc
gccgagcacgtgcccgtccggatcgacgcggaccgccgcgacctgcccgaggtcgagcag
ttggtccggcggtggctggacctcgacgccgagcctgccgtgatcgacgcggcgctcggc
gccgatccgcagctcgccccgatggtggcggcccggccgggactgcgcgtgctcgggacg
acggactggttcgacaccgccgtgcagaccgtgctgggccagcaggtcagcgtcgccgcc
gccgccacgttcgccggtcggctcgtcgcccgctacggagatccgggatccggtgctatg
cgctgctttccggccccggagcggctcgccgccgcggatgccgacgaggtgcagggggcg
gtggggctcacccgggcgcgggtgcggaccgtgctggcgctcgctcgcgccgcggccgac
gggctcgatccggccgaaccggtgcggttccgcaccgatctggcggcactgcccggcatc
gggccgtggaccgtggactacctcgccgtccgcgtcctcggggaccgtgacgcgtatccc
gccggagatctggtgctgcgcagggccctcggcgtgggttctgcccgcgaggcgacggtc
cgggcccggcagtggagtccgtggcgggcctacgccgcgttccacctgtggacgcactcc
gcctacggctcgtcctcgccgtaa
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integrated database retrieval system
