Rhodococcus sp. DMU1: HFP48_24680
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Entry
HFP48_24680 CDS
T11419
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhdm Rhodococcus sp. DMU1
Pathway
rhdm00061
Fatty acid biosynthesis
rhdm00071
Fatty acid degradation
rhdm01100
Metabolic pathways
rhdm01212
Fatty acid metabolism
rhdm02024
Quorum sensing
rhdm04146
Peroxisome
Module
rhdm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HFP48_24680
00071 Fatty acid degradation
HFP48_24680
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HFP48_24680
09145 Cellular community - prokaryotes
02024 Quorum sensing
HFP48_24680
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhdm01004
]
HFP48_24680
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhdm04147
]
HFP48_24680
Enzymes [BR:
rhdm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HFP48_24680
Lipid biosynthesis proteins [BR:
rhdm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HFP48_24680
Exosome [BR:
rhdm04147
]
Exosomal proteins
Exosomal proteins of breast milk
HFP48_24680
Exosomal proteins of breast cancer cells
HFP48_24680
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QIX52403
LinkDB
All DBs
Position
5418950..5420530
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AA seq
526 aa
AA seq
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MLNLSVLLEDSVRRYPDRVALVFGTERLTYAHLDALANQVANLLAARGIGPGDKVALSCP
NIPQFPAVYYGILKAGAIVVPLNILLKPREITYHLDDSGAALYFCFEGTDDLPMGEYGRA
GFDNAAGCREMILLTADPDTSSPIPGVDTLARAVEARPDTFDTVVREPGDTAVILYTSGT
TGRPKGAELTHANMLLNALTANRLFDSTSLRPDTYLLTLPLFHSFGQTVTMNAGLSVGAT
LVLLPRFDAKAALELMVGEDITVFAGVPTMYWALLGAVDDTVDVDRISRSLRRAISGGAA
LPVEIHAQFERRFGVRILEGYGLSETSPLAVFSDPERDPRPGSIGVPVWGIEAKLVDEHW
NPVLGDDQVGELALRGHNVMKGYLGRPDATAEVMRDGWFRTGDLARRDEDGFYYIVDRAK
DLIVRGGFNVYPREIEEVLMTHAAVSLAAVVGVPDERHGEEVKAFVILEPGARITETELI
DWCKDQMAGYKYPRSVEFTTALPMTATGKILKRELVSAVVDQVRGR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaatctctccgtactactggaagactccgtccgtcgctaccccgatcgcgtcgca
ctggtcttcggcacggaacgcctcacctacgcccacctcgacgccctggccaaccaggtg
gcgaacctgctcgccgcccggggcatcggccccggcgacaaggtcgcgctctcgtgcccg
aacatcccgcagttccccgccgtctactacgggatcctcaaggccggcgcgatcgtcgtg
ccgttgaacatcctgctcaagccgcgcgagatcacctaccatctcgacgattccggtgcc
gccctctacttctgcttcgagggcaccgacgacctgcccatgggcgaatacggccgtgcc
ggattcgacaacgccgccggatgccgcgagatgattctcctcaccgcggacccggacacg
tcgtcgccgatccccggcgtcgacaccctcgcccgggccgtcgaggcccgtccggacaca
ttcgacaccgtcgttcgcgagcccggcgataccgcggtgatcctctacaccagcggcacc
accggccggccgaagggcgcggaactgacgcacgcgaacatgctgctcaatgccctgacc
gccaaccggttgttcgacagcacctcgctgcgcccggacacctacctgctcaccctgcca
ctgttccattccttcggccagaccgtgacgatgaatgccggcctgtcggtcggcgccacc
ctcgtgctcctgccgcggttcgacgcgaaggcggcgctcgagctcatggtcggcgaggac
atcaccgtcttcgccggggtgccgaccatgtactgggctctgctcggcgcggtcgacgac
accgtcgacgtcgaccgcatctcccgctccctgcggcgcgcgatctccggtggcgccgcg
ctgcccgtggagatccacgcccagttcgaacgccgcttcggcgtgcggattctcgagggc
tacggtctgtccgaaacctcgccgctggcggtcttcagcgaccccgaacgcgacccccgc
cccggctcgatcggtgttccggtctggggcatcgaggccaagctcgtcgacgagcactgg
aaccccgttctcggcgacgaccaggtcggggagctcgcactccgcggccacaacgtgatg
aagggctacctcggccggcccgacgccaccgccgaggtgatgcgcgacggctggttccgc
acaggcgatctcgcacggcgcgacgaggacggcttctactacatcgtcgaccgggccaag
gatctcatcgtccgcggcggattcaacgtctacccccgagagatcgaggaagtactgatg
acgcacgccgcggtctcgctcgcagccgtcgtgggcgtcccggacgaacggcacggcgaa
gaagtcaaggcattcgtcatcctcgaaccgggtgcacggatcaccgagacggagctgatc
gactggtgcaaggaccagatggccggctacaagtacccccggtccgtcgaattcaccacg
gccctgcccatgaccgccaccggaaagatcctcaagcgcgagctggtctcggccgtcgtc
gaccaggttcgcggccgatga
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