Rhodococcus sp. DMU1: HFP48_27085
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Entry
HFP48_27085 CDS
T11419
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
rhdm Rhodococcus sp. DMU1
Pathway
rhdm03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HFP48_27085 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhdm03032
]
HFP48_27085 (dnaB)
Enzymes [BR:
rhdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HFP48_27085 (dnaB)
DNA replication proteins [BR:
rhdm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HFP48_27085 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QIX52833
LinkDB
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Position
complement(5906583..5909798)
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AA seq
1071 aa
AA seq
DB search
MAVVDDRGHSDYPGPPEEPAGDFGRQPPQDMVAEQSVLGGMLLSKDAIADVLEVLRPGDF
YRPAHQAVYDAVLDLYSRGEPADPVTVSAELDRRGELRRIGGAAYLVTLTQTVPTAANAS
YYAEIVAEKAILRRLVEAGTRIVQYGYAGSEGQDVAEVVDRAQAEIFEVSERRTSEDFVP
LEELLQPTMDEIDSIASRGGISLGVPTGFAELDEVTNGLHPGQMIIVAARPGVGKALALD
TPLPTPGGWTTMGEVAAGDELLDAHGRPTRVLAATEVLHGRPCFEVKFSDGTVLVADEQH
QWVTSDGGPSRVRTTGEIAASLADGHVVGNVAALQLPVADLPVAPFTLGAWLGGPSADPH
VHMRVQGEGGFAEELMTLGARIPGAYQRAAERQRRELLAGLLDAGGHVGDDGTVRFESDC
ARLRDDVAELLAGLGYTCTTTGSTVRFATDDDVFVLPSKAKAHKETRTGVPRERRIVAVR
PVESVPVRCVEVDGEHLYLAGRSMIPTHNSTLGMDFLRSCSVKHGMASVMFSLEMGKTEI
VMRLLSAEAKIKLGDMRSGRMTDDDWTRLARRMSEISEAPLYIDDSPNLTMMEIRAKARR
LKQKHDIRLIVVDYLQLMTSGKKVESRQQEVSEFSRSLKLLAKELEVPVVAICQLNRGPE
QRTDKKPMVSDLRESGCLTASTRVLRADNGCEVTLGELLASGEQPVVWSLDERMRMVARP
MTKVFPSGRKEVFRLTLDSGRQVEATANHPFLTVDGWIPLGELTAGERVAVPRAVPAPLE
THAVSEDDVVALAERTVADSSVPPQAFSLPKEQIAALVCHVWEGNGIVAWDAVEGRAAVR
YPSADRRLADDLARLLLRIGVFARIAAAGTGSGWDVVVTGPENQAVFLHDVGAHGTAAQW
VLAQLGPKLVRHDADTLTPDVEATLSRLLAVEELAPRELVAAAASRSAGGSRSSLAQVAG
VLDTAGIEMLATNNVYWDEIVSVTSIGEQDVFDGTVPGTHNFVADGISVHNSLEQDADMV
ILLHRPDAFERDDPRGGEADLILGKHRNGPTATITVAHQLHLSRFVDMARG
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtagtagacgatcggggccattccgactacccgggaccgcccgaggagccggcc
ggcgacttcggccgccagcccccgcaggacatggttgcggagcagtccgtgctcggtggc
atgctgctcagcaaggacgccatcgccgacgtgctcgaagtgctgcggcccggcgatttc
taccgccccgcccatcaggccgtctacgacgccgtcctcgacctctacagccgcggtgag
cccgccgaccccgtcacggtgtccgcggaactcgaccggcgcggagaactccgccgcatc
gggggcgccgcctacctggtgaccctgacccagaccgtgcccaccgctgcgaacgcgagc
tactacgccgagatcgtcgccgagaaggccatcctgcgccgcctcgtcgaggccggaacg
cgcatcgtccagtacggttacgccggctccgagggccaggacgtcgccgaggtcgtcgac
cgggcccaggccgagatcttcgaggtctccgagcgccgcacgtccgaggacttcgtcccg
ctcgaagagctgttgcagcccaccatggacgagatcgactcgatcgccagccgcggcggc
atctccctcggtgtgcccaccggattcgccgagctcgacgaggtcaccaacggcctccat
cccgggcagatgatcatcgtcgccgcccgtccgggcgtcggcaaggcgctggccctcgac
actcccctgcccacccccggcggttggacgaccatgggcgaggtcgccgccggcgacgaa
ctcctcgacgcccacggccgccccacccgggtgctggccgccaccgaggtgctgcacggc
cggccgtgcttcgaggtgaaattctccgacggcaccgtcctcgtcgccgacgaacagcac
cagtgggtcacctccgacggcggcccgtcgcgcgtgcgcaccaccggggagatcgccgcg
tccctcgcggacggtcacgtcgtcggcaatgtcgccgcgctgcagctgcccgtcgccgat
ctgcccgttgccccgttcaccctcggcgcctggctcggcggcccctccgccgatccccac
gtgcacatgcgggtgcagggcgagggcgggttcgccgaggaactcatgacgctcggcgcc
cgcatccccggcgcctaccagcgggcagcggaacggcagcggcgcgagctgctcgccggt
ctgctcgacgccggcggccacgtcggcgacgacggcaccgtccgcttcgaatccgactgc
gcccgtctgcgcgacgacgtcgccgagctcctggccggcctcggctacacctgcaccacc
accggctccacggtgcgcttcgccaccgacgacgacgtcttcgtcctccccagcaaggcc
aaggcgcacaaggagacccgcacgggggtgccgcgggaacgccgcatcgtcgccgtccgc
cccgtcgagtccgtgccggtgcggtgcgtcgaggtcgacggcgagcacctgtacctcgcc
ggacggtccatgatccccacccacaactccacgctcggcatggacttcctgcggtcctgc
tccgtcaagcacggcatggcctccgtcatgttctccctcgagatgggcaagaccgaaatc
gtcatgcggctgctctcggccgaggcgaagatcaagctcggcgacatgcgttcgggccgc
atgaccgacgacgactggacccggctcgcccggcggatgagcgagatcagcgaagcgccg
ctgtacatcgacgactcccccaacctgacgatgatggagatccgcgcaaaggcgcggcgc
ctcaagcagaaacacgacatccggctgatcgtcgtcgactacctgcagctgatgacctcc
ggtaagaaggtcgagtcccgccagcaggaggtctccgaattctcccgtagcctcaagctt
ctcgcgaaggagctcgaggtcccggtggtcgcgatctgtcagctcaaccgtggccccgag
cagcgcaccgacaagaagccgatggtctccgatcttcgcgagtcgggttgcctcactgcg
agcacccgcgtcctgcgcgcggacaacggctgcgaggtcaccctcggcgagttgctggcc
agtggtgaacagcccgtcgtctggtcgctggacgagcgcatgcgtatggtcgcccgcccg
atgaccaaggtgttcccgagcggacgcaaggaagtgttccgtctgacgctcgactccggg
cgtcaggtcgaggccaccgcgaaccatcccttcctcaccgtggacgggtggattcccctc
ggcgagctgacggccggggagcgcgtcgcagtaccccgcgcggttcctgcccccctcgag
acgcacgccgtctcggaggacgacgtcgtcgcgctggctgagcgcaccgtcgccgatagc
tctgttccgccacaggcattctcgctgccgaaggaacagatcgccgcgctcgtgtgccac
gtctgggagggcaacgggatcgtcgcgtgggacgcggtcgaaggacgagccgctgtccgg
tatccgtccgcagaccggcgcctcgccgacgacttggcccgccttctcctgcgaatcggt
gtcttcgctcggatcgccgcggccggaacaggctcgggctgggatgttgtcgtcaccggt
ccggagaatcaggccgtcttcctgcacgacgtgggtgcacacggcactgcggcgcagtgg
gtgctcgctcagctcgggccgaagctcgtacgccacgacgccgacaccctgacacccgac
gtcgaggcgacgctgagccggctcctcgcagtcgaggagctcgccccccgtgagctggtc
gcggccgcggcttcgcggtccgcagggggttcgcgatcgagtctggcccaggtggcgggc
gtcctcgacaccgccggcatcgaaatgctcgccaccaacaatgtgtactgggacgagatc
gtgtccgtcaccagcatcggtgagcaggacgtgttcgacgggaccgtcccgggcacacac
aacttcgttgccgacggcatctcggtgcacaacagtctcgagcaggacgccgacatggtg
atcctgctgcaccggcccgacgcattcgaacgtgacgacccgcgcggcggcgaggcggac
ctgatcctcggcaagcaccgcaacggtccgaccgccaccatcaccgtcgcgcaccagctg
cacctgtcgcggttcgtggacatggcgcggggctga
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