KEGG   Rhodococcus sp. DMU1: HFP48_28635
Entry
HFP48_28635       CDS       T11419                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rhdm  Rhodococcus sp. DMU1
Pathway
rhdm00061  Fatty acid biosynthesis
rhdm00071  Fatty acid degradation
rhdm01100  Metabolic pathways
rhdm01212  Fatty acid metabolism
rhdm02024  Quorum sensing
rhdm04146  Peroxisome
Module
rhdm_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rhdm00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    HFP48_28635
   00071 Fatty acid degradation
    HFP48_28635
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    HFP48_28635
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HFP48_28635
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rhdm01004]
    HFP48_28635
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhdm04147]
    HFP48_28635
Enzymes [BR:rhdm01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     HFP48_28635
Lipid biosynthesis proteins [BR:rhdm01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   HFP48_28635
Exosome [BR:rhdm04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   HFP48_28635
  Exosomal proteins of breast cancer cells
   HFP48_28635
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: QIX53624
LinkDB
Position
unnamed:complement(117969..119672)
AA seq 567 aa
MTEIDERHTRAEASNRREPTFDVESLRGRRATNRWERTSVGDVFERLTWSYPDKISLTGA
CGESEYAALTNARADALANQVAHGLAAAGLVPGDRVMMFCDNTVEAFVTKIGIAKAGMVV
APMNVNLAPDVLRHLVALVEPSAVIVDAEMWPRIAAVVADAGLPAIATIMAGGDVVEGSK
PWSEFVAGQPTTEPDVEIHGDDVWELLFTSGTTSLPKAVMITHHSTQVAALSMAVSLTRG
LAHECDVRLAVFLPMIYHVGDQPFPFGALMSGGTVHLGRGQTGARVAQALHDDRSTALFV
GSPQFAADVLDQLEANIDLDVSACTMVVYGWGAMPPRTLDRLRARFGTQVHVLGVFGQTE
SIACHRFWPSKWPEAYAATAPSINCVGVPSPMLSSDVVDIDGNSVRGVPGEAVYRSAVMT
AGYYRNEEATREAFRDGWFHTGDSVIVDENGLRSLVDRYKDIVKSGGENISSMRVESMLA
THPAVARAAVVGLPHPRWGEAVTGVVILHDDATVAEDELIEFCRERLAGYETPKSIVFVA
ELPETVGKIQKYRLRTDFADLYLSGES
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgaccgagatcgatgagcgccatacccgggccgaggcatcgaatcgccgcgaacccacc
ttcgatgtcgagagcctgcgcgggcgacgcgcaacaaaccgatgggaacgtacgtccgtc
ggcgatgtcttcgaaagactcacgtggagctatccggacaagatctccctcaccggcgcc
tgcggcgagtcggagtacgcggcactcaccaatgcgcgggccgacgcactcgcgaaccag
gtcgcccacggccttgccgcggcgggtctggttccgggcgaccgtgtgatgatgttctgc
gacaacacggtcgaggcattcgtgaccaagatcggtatcgcgaaggcggggatggtcgtc
gccccgatgaacgtgaatctcgcccctgacgtgcttcgtcacctggtggcgctcgtagaa
ccaagtgctgtgatcgtcgacgcggagatgtggccccgaatcgccgccgtggttgccgat
gctggcctgcccgccatcgcgaccatcatggccggcggcgatgtggtagaagggtcgaag
ccctggagtgaattcgtcgcgggacaaccgacgactgagccagacgtcgagatccatggc
gacgacgtctgggaactcttgttcacctccggtacgacatcactacccaaagccgtgatg
atcacccatcactccacccaggtggcagcgctgagcatggcggtctcgctcacccgtggt
ctcgcccatgaatgcgacgtccgcctggccgttttcctgccgatgatctaccacgtcggc
gatcagccgttcccgttcggcgccctgatgtcgggtggcaccgtccacctcggccgcgga
cagaccggggcgcgggtggcgcaggctctgcacgatgaccggagcaccgcactgttcgtg
ggatcgccccagttcgcggccgatgtgctcgaccagttggaagcgaatatcgatctggat
gtctcagcgtgcacaatggtggtttacgggtggggcgccatgccgccgcgcacgctggac
cgtctgcgcgccagatttggcacccaggtgcacgtgctcggggtcttcgggcagaccgag
tcgatcgcctgtcaccggttctggccgtcgaagtggcccgaggcatatgccgccaccgcg
ccgtcgatcaactgcgtgggcgttcccagcccgatgttgtcttccgatgtggtcgacatt
gacgggaacagcgtgcggggtgtccccggcgaggcggtctaccggtccgcggtgatgacc
gcgggttactaccgaaacgaagaagcgacgcgtgaggccttccgcgacggctggttccac
accggggacagcgtcatcgtcgacgagaatggactccgttccctggtcgatcgctacaag
gacatcgtcaaaagcggtggcgagaacatttcgagcatgcgtgtcgagtcgatgctcgcc
acccacccggcagttgcgcgcgccgcagtggtcggcctaccccatccacgatggggagag
gcggtgaccggtgttgtcattctgcacgacgatgcgaccgtcgccgaggatgaactgatc
gaattctgccgggagcgtctcgcgggctacgaaacacccaagtcgatcgtcttcgtggcc
gaattgccggaaaccgtgggcaagatccagaagtatcgtctgcgcaccgacttcgccgac
ctctacctgagcggggaatcatga

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