Rhodococcus sp. DMU1: HFP48_29065
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Entry
HFP48_29065 CDS
T11419
Name
(GenBank) pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
rhdm Rhodococcus sp. DMU1
Pathway
rhdm00020
Citrate cycle (TCA cycle)
rhdm00620
Pyruvate metabolism
rhdm00720
Other carbon fixation pathways
rhdm01100
Metabolic pathways
rhdm01120
Microbial metabolism in diverse environments
rhdm01200
Carbon metabolism
rhdm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rhdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HFP48_29065
00620 Pyruvate metabolism
HFP48_29065
09102 Energy metabolism
00720 Other carbon fixation pathways
HFP48_29065
Enzymes [BR:
rhdm01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
HFP48_29065
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
BSH_ALG44
BSH_RND
RnfC_N
ATP-grasp_3
BSH_YhbJ
BSH_CusB
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QIX53683
LinkDB
All DBs
Position
unnamed:220122..223511
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AA seq
1129 aa
AA seq
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MFDKILVANRGEIAVRAFRAAYELGAATVAVFPYEDRNSTHRLKADESYQIGVSGHPVRA
YLSVEEIIDAARRSGADAIYPGYGFLSENPDLAAACAAAGITFVGPSTEVLELTGNKARA
VAAAREAGLPVLTSSKPSADVDELVAAAEQMSFPVFVKAVAGGGGRGMRRVAVIEDLTEA
INAASREAESAFGDPTVFLEQAVINPRHIEVQILADTHGDVIHLFERDCSVQRRHQKVIE
LAPAPNLAPELRERICADAVAFARHIGYSCAGTVEFLLDERGQHVFIEMNPRIQVEHTVT
EEITDVDLVQSQLRIASGESLADLGLSQDRLQIRGAALQCRITTEDPTNGFRPDTGRITA
YRTPGGAGVRLDGGATLGADVSAHFDSMLVKLTCRGRDFATTIARARRAVAEFRIRGVAT
NVPFLQAVLDDPDFRAGRVTTSFIEQRPELLTARTSADRGTKILTYLADVTVNQPHGERP
TAIYPRDKLPTLDPSLLASPPDGSRQRLLALGPEGFAADLRARPQLGVTDTTFRDAHQSL
LATRIRTSDLLAVAPYVASSTPELLSVECWGGATYDVALRFLKEDPWARLAALREAIPNI
CLQMLLRGANTVGYTPYPTAVTTAFVDEAAATGIDIFRIFDALNNIEAMRPAIDAVRETN
TAVAEVAMSYTGDLADPDETLYTLDYYLRLAEQIVSAGAHVLAIKDMAGLLRAPAARKLV
TALRREFDLPIHVHTHDTPGGQLATYLAAWEAGADAVDGASAALSGTTSQPALSAIVAAA
AHTDRDTGLDLAAVCDLEPYWEAVRRVYAPFESGLPAPTGRVYTHEIPGGQLSNLRQQAI
ALGLGDRFEAVERAYADADRMLGRLIKVTPSSKVVGDLALALVGRGISAAGFAENPSGYD
IPDSVIGFLRGELGDPAGGWPEPLRTRALEGRAAAPEVTAISDADEQALQQPGRARQETL
NRLMFPAPTREFEQHRETYGDTSRLSANQFFYGLRYGEEHRVELEPGVDLLIGLEAVSEP
DDRGMRTVMAILNGQLRPVQVRDRAVGVEIPAAEKAEPGNDHHVAAPFTGVVTVAVAVGD
EVEPGATIATIEAMKMEAAITTPKGGTIARIAITTTAHVEAGDLVIELS
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacaagatcctggtggccaaccgcggcgagatcgctgtgcgcgcgttccgcgct
gcatatgagctcggagccgccacagtggcggtattcccgtatgaagaccggaattccacg
catcgattgaaggcggacgagtcgtatcagatcggggtgtcggggcacccggtgcgggcg
tatctgtcggtggaggagatcatcgacgcggcgcggcggtccggcgcggatgcgatctat
cccggttacgggttcttgtcggagaacccagatctggcggcggcgtgtgcggcggcgggg
atcacgttcgtgggtccatcgaccgaggtgttggagctgacgggcaacaaggcccgagcc
gtggcggccgcgcgtgaggcaggtctgccggtcctgacgtcctcgaagccgtcggccgac
gtcgatgaactcgtcgccgctgccgagcagatgtcgtttccggtgttcgtcaaggcggtt
gccggtggtggtggccgtgggatgcgtcgggtcgcggtgatcgaggacctgaccgaggca
atcaatgcggcgtcgcgtgaggcggagtcggcgttcggtgatccgacggtgttcctagag
caggcggtgatcaatccgcgccacatcgaggtgcagatcctggcagacacccacggggac
gtgattcatctgttcgaacgtgattgcagtgtgcagcgccgtcaccagaaggtgatcgag
ttggcgccggcaccgaatttggcaccggagctgcgggagcgcatctgcgcggatgcagtc
gccttcgcccgccacatcggctattcatgcgcgggcaccgtcgagttcctgctggatgag
cgcgggcaacatgtgttcatcgagatgaatccgcggatccaggtcgagcacacggtgacc
gaggagatcaccgacgtcgatctggtccagtcgcagttgcggatcgcctccggcgaatct
ctggccgatctcgggttgtcgcaggaccggctgcagatccggggggcggccttgcagtgc
cgcatcaccaccgaggacccgacgaacgggttccgcccggacaccggccgtatcaccgca
taccgcaccccgggtggggcgggggtccgtctggacggaggcgcaacactgggcgcggac
gtcagcgctcattttgattcgatgttggtgaagttgacgtgccggggccgggatttcgcg
acgacgatcgcgcgggcgcggcgcgcggtcgctgagttcaggatccgtggggtcgcgacg
aatgtgcctttcctgcaggcagtcctcgatgacccggatttccgggccggccgggtcacg
acgtcgttcatcgaacaacgccccgagctgttgaccgcgcggacatcggcggaccgtggg
acgaagattctcacctatctggcggatgtgacggtcaaccagccccacggcgagcgaccg
accgccatctatccacgtgacaaactgcccaccctggacccgtcgctgctcgcttcgccg
ccggacggatcccggcaacgactgctcgcactcggtccggaggggttcgccgccgatctg
cgggcgcgtccgcaactcggagtcaccgacaccaccttccgcgacgcgcatcaatcgttg
ctggccacccgcatccgcacgtcagacctgctggcggtcgcaccgtatgtcgcgtcgtcg
acgccggagttgttgtcggtggagtgctggggtggggccacctacgacgtggcgttgcgg
ttcctcaaggaagatccatgggcgcggctggcggcattgcgcgaagcgatcccgaacatc
tgcctgcagatgttgctgcgcggagccaacaccgtcggttacaccccgtatccgacggcg
gtgaccaccgccttcgtcgatgaggccgctgcgaccggcatcgacatcttccggatcttc
gacgcgctgaacaatatcgaggcgatgcgcccggcgatcgacgcggtacgggagaccaac
accgcggtcgccgaggtcgccatgtcctacaccggcgacctcgccgaccccgacgagacc
ttatacaccctggactactatttgcgccttgccgagcagatcgtctccgcaggcgcacac
gtgctggcgatcaaggacatggccgggctgctccgcgcccccgccgccaggaaactcgtc
accgcgttgcgtcgtgagttcgatctcccgatccatgtccacacccacgacacccccggc
ggacaactcgccacctatcttgcggcgtgggaagccggcgccgacgccgtcgacggggcc
tcggcggcgctctccggcaccacctcacaaccggcgttgtcagcgatcgtggccgcagct
gcgcacaccgaccgtgacaccggactcgatctcgccgcggtgtgcgatctcgaaccgtac
tgggaagcggtgcgcagggtgtacgcgccgttcgaatccggcctgccagcccccaccggg
cgcgtttacacccacgagatccccggcggacagctgtcgaacctgcgccagcaggccatc
gcactcgggctcggtgaccggttcgaggccgtcgagcgggcctacgctgacgccgaccgc
atgctcggccgcctgatcaaggtcaccccctcctcgaaggtcgtcggtgacctggccctg
gctctggtcggccgcgggatctcggcggcggggttcgccgagaatccatcgggctacgac
atcccggattcggtcatcgggttcctacgcggcgaactcggcgaccctgctggcggctgg
cccgaaccacttcgcaccagggcactcgaaggccgggcggccgcaccggaggtcacagcg
atctccgatgctgacgaacaagccctgcaacagcccgggcgggcgcgtcaggagacgttg
aaccggttgatgttccctgcaccgacacgcgagttcgaacagcaccgcgaaacctacggc
gacacctcccgactctccgccaaccagttcttttacgggctgcgctacggcgaggaacac
cgcgtcgaactcgaacccggcgtcgacctgctcatcggactcgaagcggtcagtgaaccc
gacgaccgcggtatgcgcaccgtgatggccatcctcaacggccagctacggcccgtacag
gtccgcgaccgcgccgtcggcgtcgagattcctgccgcagaaaaggccgaacccggcaac
gatcaccacgtcgccgcccccttcaccggtgtcgtcaccgtcgccgtggccgtcggggac
gaagtcgaacccggcgccaccatcgccaccatcgaagccatgaagatggaagccgccatc
accacccccaagggcggcaccatcgcacgtatcgccatcaccaccaccgcgcatgtggaa
gccggcgacctcgttatcgaactgagctga
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