Rickettsia conorii subsp. heilongjiangensis: Rh054_01530
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Entry
Rh054_01530 CDS
T01587
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rhe
Rickettsia conorii subsp. heilongjiangensis
Pathway
rhe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rh054_01530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhe03400
]
Rh054_01530
DNA repair and recombination proteins [BR:
rhe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rh054_01530
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Rh054_01530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
AAA_22
AAA_7
T2SSE
Microtub_bd
LarB_N
DUF87
P-loop_SecA
SWI2_SNF2
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AEK74308
LinkDB
All DBs
Position
complement(274550..276535)
Genome browser
AA seq
661 aa
AA seq
DB search
MNNFSIISEYKPAGDQPKAIDEIIEGLSSKKRSQMLLGITGSGKTFTMANIIERTNRPTL
IMTHNKTLAAQIYSEMKSLFPKNAVEYFVSYYDYYQPEAYIARTNTFIEKDSSINEQIDL
MRHAATRSLLERRDVIVVSSVSCIYGLGSPDLYYQMMVNLAPGQSYPRDQLLNDLINLQY
ERNDIGFERGCFRVKGDNIDIFPSHYSDKAWRLSFFGNELEYIHEFDPLTGEKLAKLDKA
MVFGNSHFVMPQETVNNAISGIEEELQKRLEFLKSQDKPLETQRLNQRTQYDLEMLTETG
SCKGVENYSRFFTGRNAGEPPPTLFEYLPEDALLFVDESHVSVPQIRAMYNGDRARKEVL
VEHGFRLPSALDNRPLKFEEWEKFRPQTVFVSATPGPFELEETGGTVVELIIRPTGLLDP
ECIIKPATNQVEDLISEIQTTIAQGFRVLVTTLTKKMAEDLTAYLQELKYKTSYLHSNVH
TLERIEILRDLRQGTIDVLVGINLLREGLDIPECGLVAILDADKEGFLRSEVSLIQTIGR
AARNSAGRVILYADKMTKSIDKAVSETLRRRQIQQEYNEKHGIIPKTINRAIHALAEFEK
IDSKLDKKQAHTLFDNPAKLKIHIDKLKKEMLKAASNLEFEQAIKLRDQLKTLEEAALEL
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttctattatctcagaatataaaccggcaggcgatcaaccaaaagcaata
gatgaaattatagaagggttaagtagcaaaaaacgctcacaaatgttgcttggtattacg
ggatcaggcaaaacctttactatggcaaatattatagagagaactaatcgtcctactctt
attatgactcataataaaactttagctgcccaaatctattcagagatgaaatcgcttttt
ccaaagaatgccgttgaatactttgtctcatattatgattattaccagcccgaagcttat
atagcacgcaccaatacttttatagaaaaagactcatcaattaacgaacaaattgattta
atgcgtcatgccgctacaagatcactattagagcgtcgtgacgttatagtagtttcttcc
gtttcctgtatttacggacttggctctcccgatttatattaccaaatgatggttaatcta
gcgcctggtcaaagctaccctcgtgatcagctactaaacgatttgataaatctacaatat
gagcgtaacgatatcggatttgagcgtggctgttttagagttaaaggcgacaacatagat
attttcccctcacattacagcgataaagcttggcgtttatcgtttttcggtaatgaactc
gaatatatccatgaatttgatcccctaacaggtgaaaaacttgctaagctcgataaagct
atggtttttggtaattcacattttgtgatgcctcaagaaacggtcaataatgccatatca
ggtattgaagaagaattacaaaaacgcttagagtttttaaagtcacaagacaaaccactt
gaaactcaaaggctaaatcaacgtactcaatatgatcttgaaatgttaacggaaaccggc
agctgtaaaggcgttgaaaactactctcgctttttcacaggacgtaatgctggtgagcca
cctcctacattattcgaatacctaccagaagatgcattattatttgttgatgaaagccat
gtatccgtaccgcaaattagagcaatgtataacggcgatcgagcaaggaaagaagttttg
gtagagcatgggtttcgtctaccctctgcacttgataacagacctttaaaatttgaagaa
tgggaaaaatttagaccacaaactgtgtttgtatctgcaactccaggaccgtttgagtta
gaagaaaccggcggcacggttgtagaattgattatcagacctacgggactgcttgatcct
gaatgtattatcaaacccgctactaaccaagttgaggatttaattagcgaaattcaaacc
actatcgctcaaggttttcgtgttctagtcaccaccttaactaaaaaaatggcagaagat
ttaaccgcctatttgcaggagctaaaatataaaacttcttatttacattctaacgttcat
actctagagcgtatagagattttacgagacttaagacaaggtactattgatgttttagtc
ggtattaatctattaagggaggggcttgacatccctgaatgcggcttagttgctatactt
gatgcagacaaagaggggtttttgcggtcggaagtatcgttaatacaaacaataggaaga
gctgcaagaaatagcgcgggtagagttatactttatgccgataaaatgactaaatctatc
gataaagccgttagtgaaacgttgcgtagaaggcaaattcagcaggaatataatgaaaaa
cacggcataattccaaaaaccatcaaccgtgctattcacgctttagcagaatttgagaaa
atcgatagtaagcttgataaaaaacaagctcatactttatttgataatcctgccaagcta
aaaattcatattgataaattaaagaaagaaatgcttaaagccgcaagtaatcttgaattt
gaacaagccataaaacttcgtgatcagctaaaaactctagaggaggcggcactcgagttg
agttaa
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