Rickettsia conorii subsp. heilongjiangensis: Rh054_02575
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Entry
Rh054_02575 CDS
T01587
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhe
Rickettsia conorii subsp. heilongjiangensis
Brite
KEGG Orthology (KO) [BR:
rhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhe03032
]
Rh054_02575
03400 DNA repair and recombination proteins [BR:
rhe03400
]
Rh054_02575
Enzymes [BR:
rhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Rh054_02575
DNA replication proteins [BR:
rhe03032
]
Prokaryotic type
DNA Topoisomerases
Rh054_02575
DNA repair and recombination proteins [BR:
rhe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rh054_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Zn_ribbon_Top1
POLR3C_WHD
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AEK74491
LinkDB
All DBs
Position
complement(449340..451670)
Genome browser
AA seq
776 aa
AA seq
DB search
MKLVIVESPAKAKTINKYLGDEFKVIASFGHIRDLPSKKGSVLPDENFAMKYDISDKAGK
YVDAIVKDAKKADAVYLATDPDREGESISWHVAEVIKEKNQVKSDDFFKRIAFNEITKKA
IIHAVENPRKLDNNLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICE
REDEIERFKSEEYWDISLKMQNSNNELFTAKLTHVNDQKLEKFSIINEKNAKDLTEKLKS
QKFHVDKIEKKQQKRQPQPPFITASLQQEAARKLGFSAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGVTLSNDAIADIRKLIDKSYGDKYLPTSPRIYKSKVKNAQEAHEAIRPTNIT
YTPDSLKEKLEKDYYKLYELIWKRTIACQMENVIMDLVVANLASENKEYLAKANGSTIAF
DGFYKVYRESMDDKAEEENKMLPPLKEQEPLKTKKVIPNQHFTEPPPRYSEASLVKKLEE
LGIGRPSTYASILSVLQDRKYVALEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDAIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKALDYHLFGENKESKVC
PSCNTGELSLKLGKFGAFLACSNYPECTFRKSIVSGNDNNENEGEPAAMPNENKVLGTDK
DGVEIYLKKGPYGPYIQLGEQEGKVKPKRSPVPASLNQNDITLDIALKLLSLPLKIGIHK
DSDEEIMIGYGKFGPYIKYMGKFISVQKKYDFLNLSLDDAMKLIEENKAKLEKKPA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtaatagtagaatcgccggcaaaggcaaaaacgataaataaatatttaggt
gatgagtttaaggtcattgcatcattcggtcatattagagatttaccttctaaaaaaggc
tcggtgttacctgatgaaaattttgcaatgaaatatgatatttccgataaagccggtaaa
tatgtagatgccatagtgaaagatgctaaaaaagctgatgcagtatatcttgcaaccgat
cctgatcgtgagggtgaatctatctcatggcatgttgcagaggtaataaaagaaaagaat
caagttaaatccgatgattttttcaaaaggatagcatttaacgaaatcactaaaaaagca
attattcatgccgttgaaaaccctaggaaacttgacaataacttagtaaatgcccaacaa
gcaagaagagctttagactatttagtcggctttaccctttcacctcttttatggcgtaag
ttaccgggatgtaaatcggcaggacgtgtgcagtctgtggctctgcgattaatatgtgag
cgagaagatgaaatagagcgttttaagtcagaagaatattgggatattagccttaaaatg
caaaatagtaataacgaactatttactgctaaattgactcacgtaaacgatcagaagtta
gaaaaattctcaattattaacgaaaaaaacgccaaagatttaaccgaaaaattaaaatct
caaaaatttcatgttgataagatagaaaaaaaacaacaaaaacgtcaaccacaacctcct
tttattactgcatcactacaacaagaagcagcaagaaaattaggttttagtgctaaaaag
actatgcaaatagcacaaaaactttatgagggtgttgatataggtaaggaaactataggg
cttattacttatatgagaaccgacggcgttacattatcaaatgatgcaatagcagatata
cgtaagttaatcgataaaagttacggcgataaatatttaccgactagccctagaatttat
aaatccaaagtaaaaaatgctcaagaagctcatgaagcaataagaccaacaaatattact
tatactcctgatagcttaaaagaaaagctagaaaaggattattataagctttatgagttg
atttggaaaagaactatagcctgccaaatggaaaatgttataatggatttggtagttgca
aatttagcttcggaaaataaagaatatttggcaaaagcaaacggatcgactatagccttt
gacggattttataaggtttatcgtgaaagtatggacgataaagctgaagaagaaaataaa
atgctgccgcctttaaaagaacaagagccgcttaaaactaaaaaagttattccaaatcaa
cattttactgaaccgcctccaagatattcagaagcaagtttagtgaaaaaacttgaagag
cttggaatcggtcgtccttcgacctatgctagtattttatcggttttacaagatcgaaaa
tatgttgctcttgagaaaaaacgatttatacctgaagagcttggacgtttggtaacggta
tttttagtcggtttcttcaaaaaatacgttgaatatgattttactgcaggacttgaaaac
gaattagacgcaatagcagccggcaaacttgaatggaaagctgctttaaataatttttgg
agcggttttaaccataatattgaatcagtaaacgagcagaaaataaccgagattattagc
tatgtacaaaaagcccttgattatcacctgttcggtgagaataaagaatctaaagtttgt
ccttcatgtaacacgggcgaacttagcttaaagcttggtaagttcggagcgtttttagca
tgtagtaattaccctgaatgtacttttagaaaatctattgttagcggtaacgataacaac
gagaatgaaggcgagcctgccgctatgcctaatgagaataaagttttaggtacggataaa
gacggagtagaaatatatctgaaaaaaggaccttacggaccttatattcaacttggcgaa
caagaaggcaaagtaaagccaaagcgtagccccgtgcctgctagcttgaaccaaaatgat
attacacttgatatagcattaaagcttctaagcttaccgctaaaaataggtattcataaa
gatagcgacgaggaaattatgataggatacggtaaattcggtccttacataaaatatatg
ggtaaatttatttcagtgcaaaaaaaatatgattttctaaatttaagcttagatgatgcg
atgaagctaattgaagagaataaagcgaaattagagaagaaaccggcgtaa
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