Rickettsia conorii subsp. heilongjiangensis: Rh054_03515
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Entry
Rh054_03515 CDS
T01587
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhe
Rickettsia conorii subsp. heilongjiangensis
Pathway
rhe03420
Nucleotide excision repair
rhe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rh054_03515
03430 Mismatch repair
Rh054_03515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhe03400
]
Rh054_03515
Enzymes [BR:
rhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rh054_03515
DNA repair and recombination proteins [BR:
rhe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rh054_03515
MMR (mismatch excision repair)
Other MMR factors
Rh054_03515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
AAA_12
DUF87
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEK74664
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All DBs
Position
615010..616971
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AA seq
653 aa
AA seq
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MQNQDFIHTLNPEQQQAVLHTEGPLLLLAGAGTGKTKVLTSRIANIIHQNLASPQNILAV
TFTNKAAKEMAERVNSLINCYGLNIGTFHSMAARILRDQIEHLNLGLNNRFTIISHDDQL
KLVKDIVKLKDIDTKKYAPKLIHIIISRWKDQGLLPTKLSVSDTNLPLQRVAKLVYEEYQ
KNLLISNVLDFGDLLLYNNELFIKNPEILRYYQEKYRYILIDEYQDTNVVQYLWARMLAS
LYKNICCVGDDDQSIYGWRGAEVGNILRFEKDFAGATIIKLEQNYRSTLPILAAASNVIN
NNKNRHGKTLWTDRENGEKIKIISCWSDKEEARYIAGEIDKLVQENRYNAGNIAILVRTG
FQTRSFEEAFINSAMPYKIIGGLRFYERMEIRDVLAYIRISLNQNDNLALERIINVPKRA
IGAASLNKIRVYALERNISNFAAIKEMLEIGEIKAKSYETLKDLITKIDNWYERFSIDAP
INVVKAILDDSGYLEMLQEEKTEEAFGRIENINEMLRAITEFNDVHDFIEHSSLVMENEV
LETNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQRSLDEDGEKGLEEERRIAYVGI
TRAKKDLYITHAESRKIFYEIVRSYPSRFITEIPDEITIRTSSMKKYNSFYKF
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcaagatttcatacatacattaaatccagagcagcaacaagcagttcttcac
actgaaggaccgcttttattgcttgcaggtgcagggacaggtaaaacaaaggtacttacc
tcaagaatagctaatattattcaccaaaatttagcctcacctcaaaatattctagctgtt
acttttactaataaagctgctaaagaaatggctgaaagagttaatagtctaattaattgc
tatggtcttaatataggcactttccactcaatggcagctaggatattacgtgaccagatt
gagcatttaaatcttggtttaaataatagatttactattattagtcatgatgatcaatta
aaactagtgaaggatatagtaaagctaaaagatattgatactaaaaaatatgctcctaaa
ttaatacatataataatttctagatggaaagatcaaggattattaccaactaaactatca
gtatcagatactaatttaccgctacagagggttgcaaaacttgtatacgaagaatatcag
aaaaatttacttatttctaatgttttagattttggagatttgctactttataataatgag
ctttttattaaaaaccctgaaatactaagatattaccaagaaaaatatcgatatatttta
atcgatgaatatcaagacactaacgttgtccagtatttatgggcaagaatgctcgcaagt
ttatataaaaatatttgctgtgtaggggatgatgatcaatctatttatggttggcgagga
gcagaagtcgggaatatattacgttttgaaaaagattttgcaggtgcaacaattattaaa
ttagagcagaattatagatcaactttgccaatacttgctgctgcttccaatgttatcaat
aataataaaaaccgtcacggtaaaacgttatggacggatagggaaaacggtgaaaagata
aaaattatctcttgttggagtgataaagaagaagcaagatatatagccggtgaaatagat
aagttagtgcaagaaaaccggtataatgccggtaatattgcaatattagtacgaaccgga
tttcaaacaagaagttttgaggaagcgtttataaatagtgctatgccttataaaattata
ggcggtttgcggttctatgaacgtatggaaataagagacgtgcttgcttatatccgtata
tctttgaatcaaaatgacaatctagcacttgagcgtattataaatgtgccgaaaagggca
ataggtgcagctagcttaaataaaattagagtctatgcacttgagcgaaatatttctaat
ttcgcagccattaaagaaatgctagaaataggtgagattaaagcaaaatcatatgaaact
ctaaaagatttgattactaaaatcgataattggtacgaaagatttagtatagatgctcca
ataaacgtagttaaagcaatacttgatgattccggttatcttgaaatgcttcaagaagaa
aaaaccgaagaagcattcggtagaatcgaaaatattaacgaaatgcttagagctattact
gaatttaacgatgttcatgattttatcgaacattcaagcttagttatggaaaatgaagtg
cttgaaaccaattacggtggctctgttactataatgaccctgcacgcagctaaagggctt
gagtttgacgtggtatttttaccgggctgggaagagggggtatttccgtctcaaagatct
ctagacgaagacggcgaaaaaggcttagaagaagaacgccgcattgcttatgtcggcatt
acgagagccaaaaaagatctctacattactcatgctgaaagcagaaaaatattttatgaa
atagtccgttcttacccttcaaggttcataaccgaaatccctgatgaaattacgatcagg
acctcttctatgaaaaaatacaattctttttataagttttaa
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