Rickettsia conorii subsp. heilongjiangensis: Rh054_03915
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Entry
Rh054_03915 CDS
T01587
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rhe
Rickettsia conorii subsp. heilongjiangensis
Pathway
rhe03410
Base excision repair
rhe03430
Mismatch repair
rhe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rh054_03915
03430 Mismatch repair
Rh054_03915
03440 Homologous recombination
Rh054_03915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhe03400
]
Rh054_03915
DNA repair and recombination proteins [BR:
rhe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Rh054_03915
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rh054_03915
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Rh054_03915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AEK74725
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Position
683823..685586
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AA seq
587 aa
AA seq
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MKPQTSINGKIWQQKMINEDIVTELCRSFKISDLLARIVSLRVNNLEEVEHFLRPKIKNL
LPDPFHLLDMEKAVDRTVTAIFNNQKICIFADYDVDGATSAALLKNIFRDLNILCDIYVP
DRIAEGYGPTPFAIQKIKDNGTELLITVDCGAMAHEALKYAKDVNLDVIVIDHHIATEIL
PDAVAIVNPNRIDEKSEYKHLAAVGVAFLFATAILSNLKKQNYFTQTMLQPNLMQYLDLV
ALGTVCDMMKLTGLNRAFVASGLKVMQQRQNIGIKTLYDMAGLNEIPKCYHLGFILGPRI
NAGGRVGKSSLGANLLSTSCSNEANKLAKELEKHNNERKVIELLMIEEAMEIALTQQDSS
LLFIVKEGWHPGVIGIVAGKLKEKFDKPVAVIALNDGIGKASCRSILGIDFGAEIINAKS
KDLLIAGGGHAMAAGFTVTAEKLQELQNFFNNAFRISINKLENYKHAEYDIDLTVNSVNF
PLMEELNTLEPFGQGNHEPIFKFDDLFVLKADIVGSKHIKCMLVPNKRGFGNKALSAIAF
NSVGTAFEDVLLSPKAKNIAVIGTLKTNNWQDNYTIQLIIKDILLKE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaaacatctataaacggtaaaatctggcaacagaaaatgattaacgaagat
atagtcaccgagttatgtcgtagtttcaaaattagtgatttacttgctaggatagtatca
ttaagagtaaataatctagaggaagtagaacatttcttgagaccgaaaatcaaaaattta
ttacctgatccttttcatctacttgatatggaaaaggctgtagatagaaccgttacagct
attttcaataaccaaaaaatatgtatctttgccgattatgatgtagacggtgctacttca
gccgctttacttaaaaatatttttagagatttaaatatactatgtgatatttatgttcct
gatcgtatagctgaaggatacggtccaactccttttgctatacaaaaaattaaagataac
ggcacagaattattaattacggttgattgcggtgctatggcacatgaagccctaaaatac
gcaaaagacgttaaccttgatgttatagtaatcgatcatcatatagctacggaaatatta
ccggatgcagtagctatagtaaatccaaatcgtattgatgaaaaaagcgaatataaacat
ttggcagccgtaggagttgctttcttatttgcaactgcaatattatcgaatttaaagaag
caaaattatttcacgcaaacaatgcttcagcctaatctaatgcagtatctagatttagtg
gctcttggtactgtttgcgatatgatgaaattaacaggcttaaatcgtgcatttgttgca
agcggattgaaagtaatgcaacaaaggcaaaatatagggattaaaacattatatgatatg
gcaggacttaatgaaataccaaaatgttatcatttagggtttattctaggtccgcgtatc
aatgcaggcggtagagtaggaaagtcaagtttaggggctaatctcctatctactagttgt
tctaatgaagcaaataaattagctaaagaacttgaaaaacataataatgaacgtaaagta
attgagttattaatgatagaagaagcgatggaaattgctttgacacaacaagatagtagt
ttattatttatcgtaaaagaaggatggcatccaggcgttataggaatcgttgccggcaaa
ttaaaagaaaaatttgataagccggtggcagttatagctttaaatgatgggattggtaaa
gcttcatgccgttctattttaggtattgattttggtgctgaaattatcaatgctaaaagc
aaagatttgctaatagcaggcggaggtcatgctatggcggcaggttttaccgtaacggct
gaaaaattacaagaattgcagaatttttttaataatgcttttagaattagcataaataaa
ctagaaaattataagcatgcggaatatgatattgatttaacggttaatagtgtgaatttc
cctttaatggaggaattaaacactttagagcctttcggtcaaggaaatcatgagcctata
tttaaatttgatgatttatttgtattaaaagcggatatcgttggaagtaagcatattaaa
tgtatgcttgttccaaataagcgaggctttggtaataaagccttatctgctattgctttt
aattcggtaggaactgcatttgaagatgttttattaagccctaaagcaaaaaatattgcc
gtaataggaacgttaaaaactaataattggcaagataattatactattcaattaattata
aaagatatacttctaaaagagtag
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