Rheinheimera sp. F8: ATY27_00525
Help
Entry
ATY27_00525 CDS
T09854
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhei
Rheinheimera sp. F8
Pathway
rhei00061
Fatty acid biosynthesis
rhei00071
Fatty acid degradation
rhei01100
Metabolic pathways
rhei01212
Fatty acid metabolism
rhei02024
Quorum sensing
rhei04146
Peroxisome
Module
rhei_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ATY27_00525
00071 Fatty acid degradation
ATY27_00525
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ATY27_00525
09145 Cellular community - prokaryotes
02024 Quorum sensing
ATY27_00525
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhei01004
]
ATY27_00525
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhei04147
]
ATY27_00525
Enzymes [BR:
rhei01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ATY27_00525
Lipid biosynthesis proteins [BR:
rhei01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ATY27_00525
Exosome [BR:
rhei04147
]
Exosomal proteins
Exosomal proteins of breast milk
ATY27_00525
Exosomal proteins of breast cancer cells
ATY27_00525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF1576
AMP-binding_C_2
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-ProteinID:
ALZ74396
UniProt:
A0A0U4VS17
LinkDB
All DBs
Position
complement(113792..115444)
Genome browser
AA seq
550 aa
AA seq
DB search
MEKVWLKRYPPGVPAEINADHYSSLVDIFEQSIATYADRIAYINMGKSITYRELDQHSQA
FAAYLQKLGLKKGDAVAIMMPNLLQYPVALLGVLRAGCTVVNVNPLYTPRELQHQLNDSQ
AKAIVIVENFAHTLADVRANVKLDHIILTKMGDMLGLLKGSIVNFVVKHIKKMIPAYQLP
GAICYKQLMQDAQSLTYQKPVVVGEDLAFLQYTGGTTGVSKGAMLTHRNMVANLEQVAGC
IGPILNPGKEFIVTALPLYHIFALTANCLTFMKYGGTNLLITNPRDMPNFVKELSKYPFT
AITGVNTLFNGLLNCPGFAELDFGRLKLSLGGGMAVQKPVAERWQKVTKTRLVEGYGLTE
CAPLVTVSPFDLDGFNGSIGLPAPSTHIKLIDDNGVEVAPGEAGEMLVQGPQVMRGYLNR
PDETDKVLKDGWLYTGDIARMDEQGFFYIVDRKKDMILVSGFNVYPNEIEEVVAMNEKVL
EVAAVGVPNEATGEAVKIFVVKKDQSLTDQELIAHCKERLTGYKVPKLVEFRTELPKTNV
GKILRRELKG
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaagtctggttaaagcgttacccgcctggcgtaccggcagaaatcaatgccgac
cactacagttcgttagtggatatttttgaacaatccattgcgacttatgctgaccgtatt
gcctacatcaatatgggtaagtcgatcacgtaccgcgaactggaccaacacagccaggcc
tttgccgcgtacttacaaaaactcggactgaaaaaaggcgatgctgtcgccattatgatg
ccaaacctgttgcaatatccggtggcgctgttaggtgtgctgcgtgccggttgcaccgtc
gtcaacgtcaacccgttgtatacgccgcgtgaattacagcatcaattgaatgattcgcag
gcaaaagccatcgtcattgtggagaacttcgcgcatacgctggctgatgtccgcgccaat
gtgaagctggaccacatcattctgaccaaaatgggcgatatgctggggctgttaaaaggc
tcgatcgtcaattttgtcgtgaagcacattaaaaagatgatcccagcctatcagttacct
ggcgcaatttgttacaaacaactgatgcaggatgcacagagcctgacttaccaaaagcct
gttgtagtgggcgaggatctggcctttttgcaatataccggtggtaccaccggcgtttcc
aaaggcgccatgttaacccaccgcaatatggtggcaaacctcgagcaagtcgcaggttgt
atcgggcctattctgaacccgggtaaagagtttattgttacggcgttaccgctgtatcac
atctttgcgctgaccgcgaactgcctgacctttatgaaatatggcggcactaatctgcta
atcaccaacccgcgggatatgcccaattttgtcaaagaactgagcaaatacccgtttact
gcgatcactggtgtcaacacactgtttaacggcttactgaactgtccgggttttgctgag
ctggatttcggccggttgaaactgtcgttaggcggtggcatggcggtgcaaaaaccggtc
gccgagcgctggcagaaagtcacgaaaacccgcttagttgaaggttatggcctgaccgaa
tgtgcgccgctggtcacagtcagtccgtttgatctggatggttttaacggcagcattggt
ttaccggcgccttccacacatatcaagctgatcgatgacaatggtgttgaagtggcaccg
ggtgaagccggcgaaatgctggtgcaggggccgcaagtgatgcggggttacctgaaccgg
ccagatgaaaccgacaaagtgctgaaagatggctggttatataccggtgacatcgcgcgg
atggatgagcagggctttttctacattgtcgatcggaaaaaggacatgatcctggtctcg
ggctttaatgtctatccgaacgaaattgaagaagtggtcgcgatgaatgagaaagtgctg
gaagttgctgcggtcggtgtaccgaatgaagcgaccggcgaagcagtgaagatttttgtc
gtgaaaaaagaccaaagtttgaccgatcaggaactgatcgcccactgcaaagaacgttta
acaggttataaagtaccgaagctggtagaattccgcacagagttacccaaaactaatgtg
ggtaagattttacgtcgggaattaaaaggctga
DBGET
integrated database retrieval system
