Rheinheimera sp. F8: ATY27_01130
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Entry
ATY27_01130 CDS
T09854
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhei
Rheinheimera sp. F8
Pathway
rhei03030
DNA replication
rhei03430
Mismatch repair
rhei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATY27_01130
03430 Mismatch repair
ATY27_01130
03440 Homologous recombination
ATY27_01130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhei03032
]
ATY27_01130
03400 DNA repair and recombination proteins [BR:
rhei03400
]
ATY27_01130
Enzymes [BR:
rhei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATY27_01130
DNA replication proteins [BR:
rhei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATY27_01130
DNA repair and recombination proteins [BR:
rhei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATY27_01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_14
AAA_16
AAA_5
AAA_30
AAA_18
AAA_19
AAA_2
PIF1
AAA_7
TsaE
nSTAND3
AAA_assoc_2
Mg_chelatase
Adeno_E1B_55K_N
TniB
Rad17
AAA_24
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ALZ74496
UniProt:
A0A0U4UW41
LinkDB
All DBs
Position
complement(229944..232253)
Genome browser
AA seq
769 aa
AA seq
DB search
MSYQVLARKWRPQNFGQLVGQEHVKTALTHALNQNRLHHAYLFTGTRGVGKTTIARIFAK
SLNCEQGVTATPCGICSACTEIDKGFFVDLMEIDAASRTKVEDTRDLLDNVQYAPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITVLSRCLQFSLKALSQ
SQIKQHLSYILSQEGIAAEDEALALLARAAKGSLRDSLSLTDQAIAQTNGDIRLGAVREM
LGFLEQSWAEILLQDVLNRDLSGMQAHIQQLVSSHSHFQAVLDDMLSLLHLAALSQYQLS
ASELALTESAFVRAVAKTHAPESIQLYYQLLLSGKRDLPFAPEPRIGLEMALLRAIAFVP
AKAGVIPEVSAGRAAALSAAHLTPEHTPVVALPPAETQVPQLHVAQPVPTAQLTVEPVVV
TVPSETAATISAPETAPESVASSGIDSVTASILARRGLQRAASNEPKKSERQQAPVVLPA
RTAPAVATPVAAPTPVDVPVAAPGPIAPAASPVQPKPADIPPWDELPEQSLQADDGVEHE
QMDEDVSVARPAEAVVATEDDVDAADITDVVESTEQWQWQQSYSAAPVQPIRHALLESLA
VPELPENLDFASETIAEVQTVADTDADLTFDGQIHAGNFAVRSSSQVDAWAQRIDSLRIG
GLMRLFLLHSSMSLDGNQLTLQVSSTQRHLDSERNRAQLQSVLAESFGQALDVQIEFVDE
VPASPQALQQRIDAARRRYVHQVLKDDPTLNGITRDFAGEWLPDSLEVF
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtgctggcgcgcaaatggcggccacagaattttggccagctggtgggg
caggagcatgtcaaaactgcactgacgcacgcgctgaaccaaaatcggctgcaccatgct
tatttgttcactggcacccgtggcgtggggaaaaccaccatcgctcgtatctttgccaaa
agtctgaactgcgagcagggcgtcaccgccacgccttgcggtatctgcagtgcctgtacc
gaaatcgataaaggctttttcgtcgatttaatggaaatagatgcggcaagccgcaccaaa
gtcgaggatacccgcgatctgctcgacaacgtacagtacgcgccaacccgtggccgctat
aaggtgtacctcatcgacgaagtgcacatgttgtctaaacacagttttaatgcgctgctg
aaaactttggaagaaccgccgcctcatgtgaagttcttactggcgaccacagatccgcaa
aaactgccgatcactgtgttgtcgcgttgcctgcaattcagtttaaaagccctgtcgcaa
agccagattaaacagcatctgagttatatcctcagtcaggaaggcattgctgccgaagac
gaagcgctggcattgttggcgcgcgctgccaaaggcagtttacgcgattcattgagtctg
accgatcaggcgatcgcgcagactaacggcgatatccgcctcggcgcggtgcgtgaaatg
ctcgggtttctggagcaaagctgggccgagatcctgctgcaggatgtgcttaatcgcgac
ttatctgggatgcaggcgcatattcagcaactggtcagtagccacagccattttcaggcc
gtgttagatgacatgttatcgttgttgcatctggcggcgttgtcacaatatcagctcagt
gcttccgagctggcgttgaccgaatcggcttttgtccgggctgtcgcgaagacacatgcg
ccggaatcgatccagctgtattaccaattattgttatctggcaaacgtgatttgcctttt
gcgccggagccacgaattggtctggaaatggcgttgttgcgcgctatcgcctttgtccca
gccaaggctggtgtgataccggaagtcagtgccggccgcgcagcggcattatcagctgcg
catctgacgccagagcacacacccgtagtcgcattgccaccagcggaaacgcaagtaccg
cagctgcatgtcgcacagccggtaccaacggcgcaactcactgtggaaccagttgttgtt
acagtgccatccgaaacggcagccacaatatcggcgcctgaaacggctccagaatctgtg
gcgagcagcggcatcgattcagttacggccagtattctggcacgccgtggtctgcagcgg
gcggcttcgaacgaaccaaaaaagtctgagcgccagcaggcgccggtcgtattacctgcc
agaactgctcctgcagtagctacacctgtggctgcaccaacaccagttgatgtccctgtg
gcagcgcccggtccgatagcacctgctgcgagtccggtacaaccaaagcctgcggatatc
ccgccatgggatgaattgcctgagcagtcgctacaagcggatgatggcgttgagcatgag
cagatggacgaagacgtgtcagtcgccagacctgcagaggcggttgtcgcgacagaagac
gatgtagatgcggcagacatcaccgacgtggtcgaatccactgaacaatggcaatggcaa
caatcttatagcgctgcgccagtgcagccgatccgtcatgctttactggaaagtctggcc
gtgccggaattgccggagaatctcgattttgccagcgaaaccatcgctgaagtgcagacg
gtcgcagacacagatgccgacctgacgtttgatggtcagatccatgccggcaactttgcc
gtacgcagtagcagtcaggtcgatgcctgggcacagcgtatcgacagcctgcgcattggt
ggcctgatgcggttgttcctgttacacagtagtatgtcactggacggtaaccagctaacg
ctgcaggtcagcagtacgcagcgtcatcttgattcggaacgcaatcgtgcgcaattgcag
tcagtgctggctgaatcatttggtcaggcgcttgatgtgcaaatcgaatttgtcgacgaa
gtcccggccagcccgcaggcgctgcaacagcgtattgatgcggcgcgccggcgttatgtc
catcaggtgctgaaggacgacccgacgttaaacggcatcacccgcgattttgccggtgaa
tggttacctgatagtctggaagtattttaa
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