Rheinheimera sp. F8: ATY27_01440
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Entry
ATY27_01440 CDS
T09854
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
rhei
Rheinheimera sp. F8
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhei03009
]
ATY27_01440
Enzymes [BR:
rhei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ATY27_01440
Ribosome biogenesis [BR:
rhei03009
]
Prokaryotic type
rRNA helicases
ATY27_01440
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
Cas3-like_C_2
AAA_22
CMS1
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
ALZ74552
UniProt:
A0A0U4V7U2
LinkDB
All DBs
Position
304316..305683
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AA seq
455 aa
AA seq
DB search
MNPTAITLKAELQQNLNDLGFTELTPVQQASLPLILAKRDLIAQAQTGSGKTAAFALGML
QLLDVKRFRIQSLVLCPTRELADQVATEIRKLGRAIHNIKVLTLCGGVPFGPQLGSLEHG
AHIIVGTPGRIEEHLQKGSLQLQDLNLLVLDEADRMLEMGFAPSLDAIVQQTPKNRQTLL
FSATFPRQIEQLAGRYLTEPARVQIETADNKPAIDQQFHAINNNDRFMAVELLLKQHQPV
SAVLFCNQKRECHDLWQYLVDQGFSALALHGDLEQRDRDLTLIRFSNQSCNVLVATDVAA
RGLDIQGLDLVINVQLAHDTETHVHRIGRTGRAGASGLAVSLVTPADDYKRALLADLYPA
AEQLLAVPDASLLQRAPRTPAMAAIWIDGGKKHKVRAGDIVGALTVDQQIEGNQIGKIQV
TEFHSYVAVPALQAKHALKLISAGIKGRNFRCRIC
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaactgcaataaccctgaaagccgaactgcaacaaaacctgaatgacctcggt
tttaccgaactgacgccggtacaacaagccagtttaccgctgatcctggccaaacgggat
ttgatcgcgcaggcgcagaccggctcaggcaaaaccgcagcctttgcgctgggtatgttg
cagttactcgacgtcaaacgctttcgcattcaaagtctggtgttatgtccgacccgtgag
ctggccgaccaggtcgcgacggagatccgcaaattaggccgcgccattcacaacatcaaa
gtgctgaccttgtgcggcggtgtgccgtttggcccacagctgggcagtctggaacatggc
gcccacatcattgtcggcacaccgggccgcattgaagaacacttacaaaaaggttcatta
cagctgcaggatctaaacctgttagtgctggatgaagccgaccggatgctggaaatgggt
tttgcccccagcctcgatgccatagtgcaacaaacgccgaaaaaccggcagacgctgctg
ttcagcgccaccttcccgcgacagattgaacagttagccggccgctatttaactgagccg
gcacgggtgcagatcgaaacagccgataataaaccggctatcgaccaacagtttcacgcc
atcaataataacgaccgttttatggcggtcgaactgctgctcaaacaacatcagccggtt
tctgccgtgttgttctgtaaccaaaaacgcgaatgtcatgatttatggcagtacctggtc
gatcagggctttagcgccctggccctgcatggcgatctggaacaacgcgatcgcgatctg
acactgatccgattcagtaaccaaagctgtaacgtgctggtagcgaccgatgtcgccgcg
cgcgggctggatattcaggggctggatctggtgattaacgtgcagctggcacacgacact
gagacccacgtccaccgcattggccgtaccggacgcgccggcgcctctggtctggcagtc
agtctggtgacgccggctgatgactataaacgcgctttactggccgatttatatccggcg
gcagaacaactgctggccgtgcccgatgcaagcttattacaacgagcaccgcgcacacct
gcgatggcggcgatctggattgacggcgggaaaaaacacaaagtccgggccggtgatatc
gtgggtgcgttaaccgttgatcagcaaatcgaaggcaatcagattggtaaaatccaggta
acggagttccattcttatgtcgcagtgccagccctccaggctaaacatgcactgaagttg
atcagtgccggcattaaaggccgcaacttccgctgccgcatctgctaa
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