Rheinheimera sp. F8: ATY27_02550
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Entry
ATY27_02550 CDS
T09854
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
rhei
Rheinheimera sp. F8
Pathway
rhei03030
DNA replication
rhei03430
Mismatch repair
rhei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATY27_02550
03430 Mismatch repair
ATY27_02550
03440 Homologous recombination
ATY27_02550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhei03032
]
ATY27_02550
03400 DNA repair and recombination proteins [BR:
rhei03400
]
ATY27_02550
03029 Mitochondrial biogenesis [BR:
rhei03029
]
ATY27_02550
DNA replication proteins [BR:
rhei03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ATY27_02550
DNA repair and recombination proteins [BR:
rhei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
ATY27_02550
TLS (translesion DNA synthesis) factors
Other SOS response factors
ATY27_02550
Mitochondrial biogenesis [BR:
rhei03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
ATY27_02550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Motif
Other DBs
NCBI-ProteinID:
ALZ74745
UniProt:
A0A0U4X3Y9
LinkDB
All DBs
Position
545558..546238
Genome browser
AA seq
226 aa
AA seq
DB search
MARGINKVILIGNLGADPEVRYMPTGGAVANITIATSESWTDKQTNEKKEQTEWHRVVIY
QRLAEIAGEYLRKGSKVYIEGRLRTRKWQDQQGVERFTTEIIANELQMLDGRGEGQSAQM
GGAPGMGAGAAMGGMAAPAQAYQAPQNRAPQAAPAAQQGYNRAPAAAQQGFNQPAPAAAA
PAYNQAPAQPAYNQPQQGFNQPQQGGFGQQRGPMEPPIDFDDDIPF
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtggaattaataaagtcattttgatcggtaacttaggtgcagatcctgaagtt
cgttacatgccaaccggcggtgcagtggccaatatcaccattgcaacttctgagtcctgg
actgacaaacaaaccaatgagaaaaaagaacagaccgaatggcaccgtgtggtgatctat
cagcgtctagccgagatcgccggtgaatacctgcgtaaaggcagcaaagtttatattgaa
ggtcgtctgcgtacgcgtaagtggcaggatcagcagggcgttgagcgtttcaccactgaa
attatcgccaacgaactgcaaatgttagacggccgtggcgaaggccaaagtgctcaaatg
ggtggcgcaccaggtatgggcgcaggcgcggcaatgggcggcatggctgctccggcacaa
gcttaccaggcaccacaaaatcgcgcaccacaggcagctccggcggcgcaacaggggtat
aaccgtgcaccggctgcagcccaacaaggctttaaccagccagctccggctgccgcagcg
ccagcctataaccaggcgccggcacaaccggcctacaatcagccacaacaaggttttaac
cagccacaacaaggcggttttggccagcaacgtggcccgatggaaccgccaatcgatttt
gatgacgatattccgttctga
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