Rheinheimera sp. F8: ATY27_06700
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Entry
ATY27_06700 CDS
T09854
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
rhei
Rheinheimera sp. F8
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhei03021
]
ATY27_06700
Transcription machinery [BR:
rhei03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ATY27_06700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Metal_resist
Sfi1
Flavi_DEAD
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALZ75474
UniProt:
A0A0U4VRV9
LinkDB
All DBs
Position
complement(1475085..1477994)
Genome browser
AA seq
969 aa
AA seq
DB search
MKFALGQRWISDAESDLGLGTVVGIDGRMVTMLFPASGETRLYAMSEAPLTRVQFNPGDT
VKSAQEFSLVIERIEEVNQTLVYHGERTDTGEAVSLRETFLDHFISFSSPQDRLFTGQID
RFDWFTLRYHSWQHLHQQQQNPQRGLVGGRLSLIPHQLHIANEVSQRHAPRVLLSDEVGL
GKTIEAGLIIHQQLLSGLASRVLIVVPESLQHQWLVEMLRRFNLKFAIFDDERLTEATAD
GGNPFETEQLVLLSLDFLTRKKAAFEAAAETHWDLLVVDEAHHLTWSEAAASTEYQRIET
LAQDTPGVILLTATPDQLGHQSHFARLRLLDPNRFYDYQAFVAEEQQYKAIATLARALQQ
EAPLSGDTAAQLQQLLQETDISAHLSLLKSADTGSERDAAIDALLSLLLDHHGTGRILFR
NTRAAIAGFPQRQPQFIGLPLPEQYQNAIKVQLSFMANQTDEFKAKTLLFPERIYQEFEG
SKTSWWQFDPRVEAVIALIKQHKYKKFLVICAHADIAIALEEAMRVKEGIRAAVFHEGMS
IFDRDKAAAYFAQDDQSAQALICSEIGSEGRNFQFAHHLVLFDLPLNPDLLEQRIGRLDR
IGQTQDIQIHLPYFIDQPQQVLLDWYHQGLGAFDATCQTGGAVYQQMRERLLPLLAQSTP
DPAAVSNLLADSREMNLQLKQQLEQGRDQLLELNSSGRGQAQQLVEQVRLQDDATILPLY
MLKAWDLLGVQQDDRSDTSIVLTPSEHLQGHYPMLDEDGITVTFDRATALAQEDIQFLSW
DHPMVQGTLDIVTQDTMGNSAAALLHNKQLPAATFFVECIYLVEASAPAELQLGRYLPPT
PIRLLLEKTGKNLAPNVPFDNFNRQLKPVGRQTASKLVGALQSTIHPLLAKAEAYADVQL
KQLQQEALRNMHNQLQAQQDRLQALAKINPLVRPEEIAHLADKQQQLDQYIGKARLRFDA
IRVIVVSHD
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgcccttggacaacgctggatcagcgacgcggaatcggacttaggtttaggc
accgttgtcggtattgatggccggatggtgaccatgttgttccccgccagtggcgaaacc
aggctgtatgccatgagcgaagcgccgctgacccgcgtacagtttaatccgggtgatacg
gtgaaaagtgcgcaggaattcagtctcgtcatcgaacggattgaagaagtgaatcaaacg
ctggtttaccatggtgagcgcactgacaccggtgaagcggttagtctgcgcgaaaccttt
ctcgaccatttcatcagtttcagttcgccacaggaccggctgtttactggtcagattgac
cgctttgactggttcacgctgcgttaccacagctggcaacatctgcatcagcaacaacaa
aatccgcaacgcggtctggtcggcggccgtttaagcctgatcccgcatcaattgcatatc
gccaatgaagtgtcgcagcgtcatgcaccacgggtgttactgtcagacgaagtaggcctc
ggcaaaaccatcgaagctggccttatcatccaccagcaactgctgtcgggccttgccagc
cgtgtattgatagtcgtgccggaatcgctgcaacatcagtggctggttgaaatgctacgg
cgctttaatctgaagtttgccatttttgatgacgaacgcctgacagaagccaccgccgac
ggtggcaatccatttgaaaccgaacagctggtactgctgagcctcgactttctgacgcgg
aaaaaagccgcctttgaagcggccgctgaaacacactgggatttgctggtcgttgacgaa
gcgcatcacctgacctggagtgaagcagcagcgagcaccgaatatcagcgcattgaaacg
ctggcccaagacactccgggcgtgattctgctgacggcaacaccggatcagctgggtcat
cagagtcattttgcccggctgcgtctgctcgatcccaaccgtttttatgattaccaggcc
tttgtcgcagaagaacagcaatataaagcgattgcgacattggcgcgtgcactacagcag
gaagcgccattatcgggtgacactgccgcgcagctgcaacagttgttacaggaaaccgat
atcagcgcgcacttgtcgctgcttaaatctgcggacaccggcagcgagcgcgatgccgcc
atcgatgcgctattgagtctgttgctggaccaccacggcaccggccgcatcctgtttcgc
aacacccgcgccgctattgccggtttcccgcagcgtcagccacagttcattggcttgccg
ctgccggagcaatatcagaatgccatcaaagtgcagctcagttttatggccaaccagacc
gacgaattcaaagcgaaaacgctgttgttccccgagcggatttaccaggaatttgaaggc
agtaaaaccagctggtggcagtttgacccgcgtgttgaagcggtgattgcactgattaaa
caacacaaatacaaaaagtttctggtgatttgtgcccatgccgacatcgccattgcactg
gaagaagcgatgcgggtgaaagaaggcatccgcgctgcagtattccacgaaggcatgtcg
atttttgaccgcgataaagcggccgcatattttgcgcaagatgatcaaagtgcgcaggcg
ctgatctgctcggaaatcggctccgaaggccgcaacttccagtttgcccaccacttagtg
ttgtttgatctgccgttgaaccctgatttgttggaacaacggatcggccggctcgaccgg
attggtcagacgcaggatatccaaatccatctgccgtatttcatcgaccaaccgcagcaa
gtgttactggactggtatcaccagggtttaggcgcgtttgatgcgacctgccagaccggt
ggcgccgtctatcaacagatgcgtgaacggctgttaccactgttggcgcaatcaacgcca
gatccggcagcagtcagcaacctgctggcagatagtcgtgagatgaacttacagctgaaa
caacagctggaacaaggccgggaccaactgctggaactgaactccagtggccgcggccag
gcgcaacagttagtcgaacaagtccgcttacaggacgacgccactattctgccgctgtat
atgctcaaagcctgggatttgctcggtgtacagcaggatgaccgcagtgacaccagcatt
gtgctgacgccttcagagcatctgcaaggtcattacccgatgctggacgaagatggcatt
accgtcacttttgatcgggccacagcactggcgcaggaagatattcagttcctgagctgg
gatcacccgatggttcagggcactttggatattgtcacacaagacacgatgggcaacagc
gcggccgcattgctgcataacaagcaacttccggcagcgacattttttgtcgaatgtatt
tatctggtcgaagcgtctgcaccggcggaactgcaactggggcgctatctgccacccaca
cccattcgcttgttgctggaaaaaaccggcaagaatctggcgccgaatgtgccgtttgac
aactttaaccgtcagctcaaaccggtcggccgccaaactgccagtaaactggtcggcgcg
ctgcaaagcacaatccacccgctgctggccaaagccgaagcctatgccgatgtgcagtta
aaacaactgcaacaagaagctttgcgcaatatgcataaccagttgcaggcgcaacaagac
cggttacaggcgctggcaaaaatcaacccgctggtacggccggaagaaattgcccacctc
gcggataaacaacagcagctggatcaatacattggtaaagcacgtctgcgctttgatgcg
atccgcgtcatcgtcgtcagtcacgattag
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