Rheinheimera sp. F8: ATY27_08630
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Entry
ATY27_08630 CDS
T09854
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rhei
Rheinheimera sp. F8
Pathway
rhei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATY27_08630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhei03400
]
ATY27_08630
Enzymes [BR:
rhei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ATY27_08630
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ATY27_08630
DNA repair and recombination proteins [BR:
rhei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ATY27_08630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF1631
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ALZ75825
UniProt:
A0A0U4NAS6
LinkDB
All DBs
Position
1933466..1934275
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AA seq
269 aa
AA seq
DB search
MPELPEVEVSRLGITPHLSNRTIRRIDVRQPMLRWPVPAEVMNVTNAPVLNVSRRAKYLL
IEVPGGSIILHLGMSGNLKILSADTPTGKHDHVDIVLDNQTLLRLNDTRRFGAVLWQATG
TDHPLLTTLGPEPLTPAFHAEQLFSHCQKRSSAIKLVLMDNHVVVGVGNIYANESLFKAG
ILPTKPANQLTLAQCAVLVEVVKQILAQAITQGGTTLKDFSQADGKPGYFKQELLVYGRG
GAACISCNSLLEEIRLGQRSTVFCRHCQA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgccagaagtcgaagtctctcggttaggcatcacgccacacctgtcgaac
agaaccattcgtcgtattgatgtgcgccagccaatgttacgctggccggtgccggcagaa
gtgatgaatgtgacgaatgcgccggtgctaaacgtcagccgccgtgccaaatatttgctt
attgaagtgcctggcggcagtattattttgcacctcggtatgtccggcaatctgaagatc
ctcagcgccgatacgcccaccggtaagcatgaccatgtcgatattgtgctggataaccag
accttattacgtctgaacgatacccgtcgttttggtgctgtgctgtggcaagcaaccggc
actgatcatccgttgttaaccactttagggccagaaccactgacgcctgcgtttcacgcg
gagcagttgttctcgcattgccaaaaacgcagtagcgccatcaaactggtgctgatggat
aatcatgtcgtggttggcgtggggaatatttacgccaatgaatccctgtttaaagccggc
atcttgccgaccaaaccggctaatcaactgactttggcgcaatgcgcagtgttggtcgaa
gtggtgaaacagatcctggcgcaggccatcacgcaaggtggcaccacgttaaaagacttt
agtcaggccgacggcaaaccgggttattttaagcaggaactactggtgtatggacgtggc
ggcgcagcctgtatcagctgcaacagtctgcttgaggagatccgtttaggccagcgcagc
acggtgttctgccggcattgtcaggcctag
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